PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1262660.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 487aa MW: 54861.8 Da PI: 7.1268

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1262660.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	116.1	3.6e-36	46	188	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......lelee....vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.. 79 lp+G++F+Ptd+el+ e+L++kvegk+ + + +i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+++ Pd.00g1262660.m01 46 LPAGVKFDPTDQELI-EHLEAKVEGKDtkshplI---DefipTIEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKIQte 132 799**********.99*****6665443...133333666646******.555666799**************73334 PP NAM 80 ......sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l Pd.00g1262660.m01 133 cdlqggETRWHKTGKTRPVMV-NGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 188 555544778********.999*******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 487 aa Download sequence
MNKSNLGSIR SSDLIDAKLE EHQMCGSKQC PGCGHKLEGK PDWLGLPAGV KFDPTDQELI 60 EHLEAKVEGK DTKSHPLIDE FIPTIEGEDG ICYTHPEKLP GVTRDGLSRH FFHRPSKAYT 120 TGTRKRRKIQ TECDLQGGET RWHKTGKTRP VMVNGKQKGC KKILVLYTNF GKNRKPEKTN 180 WVMHQYHLGQ HEEEKEGELV VSKIFYQTQP RQCNWSDRAS ATTGEGSSDI VPANSRRDSG 240 SGSCSSKEII PPHSHSHSHR EHDQMSAVAS GVAAAAPISS YSAMDIHQLK SDHFSFAPFR 300 KSFDEVGIGG EASTAREGPA SGTCEEMRGE HHHQRSVPQP HHHHHHHMAH EVVPDHHQHE 360 QHQQQQQQLH HQQIATAFHI SRPSHPISTI ISPPPLHHTS IILDQDSYSR IMLQNENFQA 420 QQQHQQQQQQ QHHKMGARSA SGLEELIMGC TSSSNVKEES SMPNPQEAEW MKYSSFWPDP 480 DNPDHHG

Sequence ? help Back to Top

Protein Sequence Length: 487 aa Download sequence

MNKSNLGSIR SSDLIDAKLE EHQMCGSKQC PGCGHKLEGK PDWLGLPAGV KFDPTDQELI  60
EHLEAKVEGK DTKSHPLIDE FIPTIEGEDG ICYTHPEKLP GVTRDGLSRH FFHRPSKAYT  120
TGTRKRRKIQ TECDLQGGET RWHKTGKTRP VMVNGKQKGC KKILVLYTNF GKNRKPEKTN  180
WVMHQYHLGQ HEEEKEGELV VSKIFYQTQP RQCNWSDRAS ATTGEGSSDI VPANSRRDSG  240
SGSCSSKEII PPHSHSHSHR EHDQMSAVAS GVAAAAPISS YSAMDIHQLK SDHFSFAPFR  300
KSFDEVGIGG EASTAREGPA SGTCEEMRGE HHHQRSVPQP HHHHHHHMAH EVVPDHHQHE  360
QHQQQQQQLH HQQIATAFHI SRPSHPISTI ISPPPLHHTS IILDQDSYSR IMLQNENFQA  420
QQQHQQQQQQ QHHKMGARSA SGLEELIMGC TSSSNVKEES SMPNPQEAEW MKYSSFWPDP  480
DNPDHHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-144	NAC family protein