PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1256820.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 751aa MW: 85409.2 Da PI: 7.0345

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1256820.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	85.2	1e-26	198	300	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk............tekerrtraetrtgCkaklkvkkekdgkwevtk 80 +fY+eYA+++GF++ +++s++sk+++e+++++f Cs++g+++e +k+ e++ +r+ ++t+Cka+++vk++ dgkw++++ Pd.00g1256820.m01 198 SFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKSynrprarqnkqdPENATGRRSCSKTDCKASMHVKRRPDGKWVIHN 289 5****************************************99999999988776554555559999******************* PP FAR1 81 leleHnHelap 91 +++eHnHel p Pd.00g1256820.m01 290 FVKEHNHELLP 300 ******975 PP

Sequence ? help Back to Top
Protein Sequence Length: 751 aa Download sequence
MAQKERNPAI TDMARICSSP INKLGAKLKD LRIGHSLNPL ACAIIFPSLR SKLSPSPPPS 60 SICNTQRESQ SVILSFKIRW EVILVPYIVL QTSKMIFSDN NQLKLNNLTM DIDLRLPSGE 120 PDKEDEEPHG IDNMLEHEEK LQNGDIENGN IVDVRDEVHA EDGGDLNSPT ADMVVFKEDT 180 NLEPLFGMEF ASHGEAYSFY QEYARSMGFN TAIQNSRRSK TSREFIDAKF ACSRYGTKRE 240 YDKSYNRPRA RQNKQDPENA TGRRSCSKTD CKASMHVKRR PDGKWVIHNF VKEHNHELLP 300 AQAVSEQTRK MSSTNEEFEK RWWKILEKFE LKDDEWTQSL YEDRKQWVPT YMRDVCLAGM 360 SAVQRSESVN SFFDKYVHKK TTVQEFLKQY EAILQDRYEE EAKADSDTWN KQPTLRSPSP 420 LEKSVSGVYT HAVFKKFQVE VLGAVACHPK REGQDETTIT FRVQDFEKNQ DFIVTWNEMK 480 TEVSCLCCLF EYKGYLCRHA LIVLQICGLS AIPAQYILKR WTKDVKNRHL VGEESDHGLS 540 RVQKFNDLCQ RAMKVIEEGS LSQESYSVAC RALEEAFGNC VSVNNSSKSL IEAGTSSVTH 600 GLLCIEDDSQ NRSMGKTNKK KNPTKKRKVN SEPDVMTVGA QDSLQQMDKL NPRAVTLDGY 660 YGAPQSVQGM VQLNLMAPTR DNYYGNQQAI QGLGQLNSIA PSHDGYYSAQ QSMHGLGQMD 720 FFRTAGGFTY GMRDDPNVRT APLHDDASRH A

Sequence ? help Back to Top

Protein Sequence Length: 751 aa Download sequence

MAQKERNPAI TDMARICSSP INKLGAKLKD LRIGHSLNPL ACAIIFPSLR SKLSPSPPPS  60
SICNTQRESQ SVILSFKIRW EVILVPYIVL QTSKMIFSDN NQLKLNNLTM DIDLRLPSGE  120
PDKEDEEPHG IDNMLEHEEK LQNGDIENGN IVDVRDEVHA EDGGDLNSPT ADMVVFKEDT  180
NLEPLFGMEF ASHGEAYSFY QEYARSMGFN TAIQNSRRSK TSREFIDAKF ACSRYGTKRE  240
YDKSYNRPRA RQNKQDPENA TGRRSCSKTD CKASMHVKRR PDGKWVIHNF VKEHNHELLP  300
AQAVSEQTRK MSSTNEEFEK RWWKILEKFE LKDDEWTQSL YEDRKQWVPT YMRDVCLAGM  360
SAVQRSESVN SFFDKYVHKK TTVQEFLKQY EAILQDRYEE EAKADSDTWN KQPTLRSPSP  420
LEKSVSGVYT HAVFKKFQVE VLGAVACHPK REGQDETTIT FRVQDFEKNQ DFIVTWNEMK  480
TEVSCLCCLF EYKGYLCRHA LIVLQICGLS AIPAQYILKR WTKDVKNRHL VGEESDHGLS  540
RVQKFNDLCQ RAMKVIEEGS LSQESYSVAC RALEEAFGNC VSVNNSSKSL IEAGTSSVTH  600
GLLCIEDDSQ NRSMGKTNKK KNPTKKRKVN SEPDVMTVGA QDSLQQMDKL NPRAVTLDGY  660
YGAPQSVQGM VQLNLMAPTR DNYYGNQQAI QGLGQLNSIA PSHDGYYSAQ QSMHGLGQMD  720
FFRTAGGFTY GMRDDPNVRT APLHDDASRH A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22170.2	0.0	FAR1 family protein