PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1254530.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TALE

Protein Properties

Length: 310aa MW: 34882.6 Da PI: 7.1608

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1254530.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.2	6.8e-09	236	270	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yps++++ LA+++gL+ +q+ +WF N+R ++ Pd.00g1254530.m01 236 KWPYPSEAQKLALAESTGLDLKQINNWFINQRKRH 270 569*****************************885 PP
2	ELK	29.6	1.5e-10	190	211	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 E+K Ll+KY gyLgsLkqEF+ Pd.00g1254530.m01 190 EIKAKLLHKYTGYLGSLKQEFM 211 8999*****************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 310 aa Download sequence
MMGFGNNTSR TGSSKAQFLS LPLMVGCSHP NLQSDHQTTD QEMMVSCSDR MKAKIMAHPL 60 FPRLLASYVS CQKVGAPSEV VARLEQACSA AVHNSEAACL GGGDPDPALD QFMEAYCEML 120 TKYEEDLTKP FKEAMLFLSK IDSQLQALTV HSSSDSASSG DNIVGRSGSP EEVDATKNES 180 CIDPRAEDRE IKAKLLHKYT GYLGSLKQEF MKKKKNGKLP KEARHQLLDW WSRHYKWPYP 240 SEAQKLALAE STGLDLKQIN NWFINQRKRH WKPSEDIQFA VMDPTQPHHH PHFYMDNNLT 300 FPMNSTSTLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62360.1	1e-106	TALE family protein