PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g125150.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ZF-HD | ||||||||
Protein Properties | Length: 251aa MW: 26963.8 Da PI: 6.5041 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 101.2 | 7.3e-32 | 32 | 86 | 3 | 58 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 ++rY+eClkNhA+ +Ggha+DGCgEfmp+ g+egt +alkCaAC+CHRnFHR+e + Pd.00g125150.m01 32 AARYRECLKNHAVGIGGHALDGCGEFMPA-GAEGTLDALKCAACNCHRNFHRKEGD 86 579*************************9.999********************965 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MDFEDQEEHD EEMEMAASYD SLGNSAGGVR GAARYRECLK NHAVGIGGHA LDGCGEFMPA 60 GAEGTLDALK CAACNCHRNF HRKEGDPSGL ALMTADPYGQ LVPLHGQHNH PQFSPYYRTP 120 AGYLHVAPHH RPLALPSTSG GGGTHSRGEE QEDDVSNPSG GGGGGGDLGM GGGLHGTASS 180 GKKRFRTKFT AEQKERMLTL AETLGWRIQK QDEPAIQQFC NETGVKRHVL KVWMHNNKHT 240 LGPSNDEPNP S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24660.1 | 2e-62 | ZF-HD family protein |