PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1246680.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 378aa MW: 41751.1 Da PI: 7.7219

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1246680.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.9	4.2e-32	258	311	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ Pd.00g1246680.m02 258 PRMRWTTSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 311 9****************************************************7 PP
2	Myb_DNA-binding	48.9	1.5e-15	259	310	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ Pd.00g1246680.m02 259 RMRWTTSLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 310 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MPHEKGISEA AGSCRLSLNP IPDLSLHISP PNANTNKNAN SAPSSICTDH RTNEAPNHHE 60 SGSCFDIWRR DMDGDGLINK SHSDSCVRRG SCSLVAAADH DTELSLANPT ASEAESRWRK 120 NYFNTRGGGG EVPERLKPIK GIPVYNCPPT NCSFPPNLEE HTHYSRVDRD QRDDFDSNKL 180 RLYLSNSLRP AAPAANSCSG MGTGFESAMS RTVGGVSGGP NYSYNYNSDL PSNGFIMRSR 240 FTPTKLSQNI NKRNMRAPRM RWTTSLHARF VHAVELLGGH ERATPKSVLE LMDVKDLTLA 300 HVKSHLQMYR TVKNTDKPLG SSDGSGDEDL LSTTTTHHHN SSALLNQRGA SNLEHDMEHH 360 HHPSNNLWGN SSRYDLHL

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MPHEKGISEA AGSCRLSLNP IPDLSLHISP PNANTNKNAN SAPSSICTDH RTNEAPNHHE  60
SGSCFDIWRR DMDGDGLINK SHSDSCVRRG SCSLVAAADH DTELSLANPT ASEAESRWRK  120
NYFNTRGGGG EVPERLKPIK GIPVYNCPPT NCSFPPNLEE HTHYSRVDRD QRDDFDSNKL  180
RLYLSNSLRP AAPAANSCSG MGTGFESAMS RTVGGVSGGP NYSYNYNSDL PSNGFIMRSR  240
FTPTKLSQNI NKRNMRAPRM RWTTSLHARF VHAVELLGGH ERATPKSVLE LMDVKDLTLA  300
HVKSHLQMYR TVKNTDKPLG SSDGSGDEDL LSTTTTHHHN SSALLNQRGA SNLEHDMEHH  360
HHPSNNLWGN SSRYDLHL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	2e-40	G2-like family protein