PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1242830.m02 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 242aa MW: 27798.8 Da PI: 9.393 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 99.3 | 1.5e-31 | 9 | 57 | 1 | 49 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49 krienk+nrqvtfskRrng+lKKA+ELSvLCdaeva+iifss+gkl+e+ Pd.00g1242830.m02 9 KRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLHEF 57 79**********************************************9 PP | |||||||
2 | K-box | 87 | 3.8e-29 | 80 | 168 | 9 | 99 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + ++a+s++qe++kLk+++e+L r+qR+llGedL++L++keLq+Le+qLe +l + R++K l++eq+e+l+kke+ l + nk+Lr kle Pd.00g1242830.m02 80 STGREAQSWYQEVTKLKAKYESLLRTQRQLLGEDLGPLNVKELQNLEKQLEGALAQARQRK--LMIEQMEDLRKKERHLGDLNKQLRVKLE 168 566789**************************************************99887..9***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MGRGRVELKR IENKINRQVT FSKRRNGLLK KAYELSVLCD AEVALIIFSS RGKLHEFGNL 60 CMTKTLERYQ HSCFNPEENS TGREAQSWYQ EVTKLKAKYE SLLRTQRQLL GEDLGPLNVK 120 ELQNLEKQLE GALAQARQRK LMIEQMEDLR KKERHLGDLN KQLRVKLETE GQNLKAIQNM 180 WSSNAAAGSS SFSFHSSQTN PMDCQPHEPV LQIGYHQYLP TEGPSISKTM ACETNFIQGW 240 VL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45650.1 | 1e-101 | MIKC_MADS family protein |