PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1242530.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TCP

Protein Properties

Length: 305aa MW: 31988.1 Da PI: 6.7556

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1242530.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	88.7	1.3e-27	1	107	24	112
TCP 24 lsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg.......................... 88 ++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s + Pd.00g1242530.m01 1 MPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSMSVPsqlrsyyspnfsvhqnqrrslfqgig 92 9**********************************************999877788888876666655555555555555555333333333 PP TCP 89 ..kaaksaakskksqksaasalnlak 112 + ++s+++ ln++ Pd.00g1242530.m01 93 lsS-----------SDSSSTLLNFQT 107 331...........333333344433 PP

Sequence ? help Back to Top
Protein Sequence Length: 305 aa Download sequence
MPALCAARVF QLTRELGHKS DGETIEWLLQ QAEPAVIAAT GTGTIPANFT SLNISLRSSG 60 SSMSVPSQLR SYYSPNFSVH QNQRRSLFQG IGLSSSDSSS TLLNFQTNSM HASMLQAKQE 120 LRDTVSLDLS ETASGEGSMG GRKRRPPEQD LNQMGGGGGG GGGGYLLQSS TGAVPASHHH 180 SQIPANFWMV ANSNNQVMSG DPIWTFPASV NNSGLYRGGM SGGLHFMNFP APMTLLPSQQ 240 QLGGSGGGGG GNDGDNMSDG QLNMLAGLNP YRHMSSTGVS ESQQASGSHS HHGGDDRHDS 300 TSHHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69690.1	7e-33	TCP family protein