PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g123650.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 377aa MW: 41945.6 Da PI: 7.5684

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g123650.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.6	2.2e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd l+ +++++G+g +W + ++++g++R++k+c++rw++yl Pd.00g123650.m01 14 KGPWSPEEDATLKAYIEKHGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	37.4	6e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ Pd.00g123650.m01 69 GGFSEEEDNIICSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDATLKAYIE KHGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDNIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK 120 QRKQQQAQQS RRAASSLKQE MIKRSESAAN FANLPVGFVN QNPYWAPELP VAVPMVNYQT 180 HEPQLIKDQA SIKNMLIKLG GRSSADNTTS TTTNTNFLYP VDISSSSSSD HQFYQSSIDV 240 LTCTSAPNNN IYAADQFATT HYDANNNGGG SSSPTMFQGL DDHNNNLQAD HHLSELVVYG 300 NDFPHQHQQL DGFYQAAETL NNGSTGTSTT SAESEISWGD INSLVYSIQM VSDYETCQQR 360 MPTVHSVFAE SNYFGLK

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MGRAPCCDKA NVKKGPWSPE EDATLKAYIE KHGTGGNWIA LPQKIGLKRC GKSCRLRWLN  60
YLRPNIKHGG FSEEEDNIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK  120
QRKQQQAQQS RRAASSLKQE MIKRSESAAN FANLPVGFVN QNPYWAPELP VAVPMVNYQT  180
HEPQLIKDQA SIKNMLIKLG GRSSADNTTS TTTNTNFLYP VDISSSSSSD HQFYQSSIDV  240
LTCTSAPNNN IYAADQFATT HYDANNNGGG SSSPTMFQGL DDHNNNLQAD HHLSELVVYG  300
NDFPHQHQQL DGFYQAAETL NNGSTGTSTT SAESEISWGD INSLVYSIQM VSDYETCQQR  360
MPTVHSVFAE SNYFGLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	5e-76	MYB family protein