PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1235890.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GATA
Protein Properties Length: 339aa    MW: 36801.6 Da    PI: 6.6179
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1235890.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.29.4e-18267301135
               GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                        C +C t kTp+WR gp g+ktLCnaCG++y++ +l
  Pd.00g1235890.m01 267 CLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRL 301
                        99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MEAPEYFQNS FCPQFTPEKR HSFDNNNNKA TNGAGGGGDH FMVEDLLDFS NDDAVITDGG  60
ATFDNVTGNS TDSSTLTVID SCNSSSLSGS EPNVIPDIGS RNIAEGPFSS DLCVPYDDLA  120
ELEWLSNFVE ESFSSQDLQK LQLISGMKAR PDEAASETRQ FQPERNRNDN AHNTTTPNNN  180
PIFNPDVSVP AKARSKRSRA APCNWTSRLL LLSQPTSSSE QSDVVSSGPA SPLPPPSTTG  240
KKTVKSAPKK KESPEGPGGG PGEGRKCLHC ATDKTPQWRT GPMGPKTLCN ACGVRYKSGR  300
LVPEYRPASS PTFVLTKHSN SHRKVLELRR QKEMDPRHC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.14e-71GATA family protein