PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1232620.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 402aa MW: 47060.4 Da PI: 7.3129

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1232620.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	74.9	1.7e-23	57	141	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ke GF +r+s+s +++ +e +++++ Cs g++++++ + ++r+etrtgC a++++++ ++++w++ ++eleHnH+++ Pd.00g1232620.m01 57 DFYNIYGKEQGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKKKSEAN-----NPRPETRTGCPAMVVIRLVDSKRWRIVEVELEHNHQVS 141 6*******************999*************99888.....9********************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
MEEVCLNSEP VFEEGDEYEL EGDFTEHDNV TGETQRRKDP TAPTVGLEFD SFDEAYDFYN 60 IYGKEQGFGI RVSNSWFRSK RKERYRAKLS CSSAGFKKKS EANNPRPETR TGCPAMVVIR 120 LVDSKRWRIV EVELEHNHQV SPQIKRFYKS HKKMILAAKS AQPLPEPVTE IHTIKLYRTP 180 VMDVGSNGYS NFTESEALHR KRMKEVVADL ESRSSSFELR TKCNFEVQLC KVYTKEIFKR 240 FQLEVEGMYS CFNTRQVSVN GPIITYIVKE RVEVEGKEKE VRCYEVLYET TQVDIRCICS 300 LFNYKGYLCR HALNVLNYNG VEEVPSRYIL PRWRKDFKCR YLLHHGSSNI DVYNPVYWHN 360 HLYKLALPVA EEGAQSEEHY KTTLQALEEL LKKFHLVEDT LV

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

MEEVCLNSEP VFEEGDEYEL EGDFTEHDNV TGETQRRKDP TAPTVGLEFD SFDEAYDFYN  60
IYGKEQGFGI RVSNSWFRSK RKERYRAKLS CSSAGFKKKS EANNPRPETR TGCPAMVVIR  120
LVDSKRWRIV EVELEHNHQV SPQIKRFYKS HKKMILAAKS AQPLPEPVTE IHTIKLYRTP  180
VMDVGSNGYS NFTESEALHR KRMKEVVADL ESRSSSFELR TKCNFEVQLC KVYTKEIFKR  240
FQLEVEGMYS CFNTRQVSVN GPIITYIVKE RVEVEGKEKE VRCYEVLYET TQVDIRCICS  300
LFNYKGYLCR HALNVLNYNG VEEVPSRYIL PRWRKDFKCR YLLHHGSSNI DVYNPVYWHN  360
HLYKLALPVA EEGAQSEEHY KTTLQALEEL LKKFHLVEDT LV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	2e-61	FAR1 family protein