PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1231200.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NF-YC
Protein Properties Length: 302aa    MW: 33774.5 Da    PI: 3.9954
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1231200.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC37.64.8e-12881681897
              NF-YC  18 nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd.ifdflvdivp 97 
                        + e+P +r+k+i+k d  ++++ +ea  l+s + +lf+  l+ rs   a e+kr+ +k   +  av+r   + dfl+d+ p
  Pd.00g1231200.m01  88 RPEFPNTRVKRIMKLDSCINKVNSEALLLVSCSAQLFLEFLAERSAEVATEKKRKIVKLEHMRVAVKRHRpTSDFLLDELP 168
                        5689**************************************************************9975389*****987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MAEEQNAARE EDNIAGEENA EQEEENAEQE EENAEQAEEN AEQEEDDAEQ EEDNPENAVE  60
NAAVKEKAKV AQEEENAEPI RSENSQIRPE FPNTRVKRIM KLDSCINKVN SEALLLVSCS  120
AQLFLEFLAE RSAEVATEKK RKIVKLEHMR VAVKRHRPTS DFLLDELPVP SQPSDHQPTD  180
RSSSRTVSHA PAPARRDRSR SRAVSDKPTP AGTRRIDHFF LTKEIPIQTE QSLIETEEAP  240
IETEEASIEI DEAPIETDEG PIETDEASIE TDEASIEIDE APIVTDEGPI ETGEGPIETN  300
ES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43250.11e-41NF-YC family protein