PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1223090.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 568aa MW: 62891.2 Da PI: 6.1674

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1223090.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	45.7	1.2e-14	31	122	1	100
EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 ffkv+ s++l lp kfa + ++ +++ +led+ g +Wev + ++ g+ l++GW+ F +++Lk g+f++F ++++s f Pd.00g1223090.m01 31 FFKVM--IGDRFSKLLFLPPKFAPTVsALV---NQKAVLEDSLGLQWEVII--SRINGSLSLKQGWNAFSLDHDLKIGEFLIFNYISSSHF- 114 77777..444555679*****9996555...347***********..9999999**********************98999. PP .EEEEE-SS CS B3 92 lvvkvfrks 100 vk+++ks Pd.00g1223090.m01 115 -IVKIYDKS 122 .*99985 PP

Sequence ? help Back to Top
Protein Sequence Length: 568 aa Download sequence
MDGKVACVEC TQKCLLDHGN KKKASPDVAS FFKVMIGDRF SKLLFLPPKF APTVSALVNQ 60 KAVLEDSLGL QWEVIISRIN GSLSLKQGWN AFSLDHDLKI GEFLIFNYIS SSHFIVKIYD 120 KSGCEKLNFP EAINQKKRTR DNRKYTFKAG PSHTIDRSSM NKRDSRTSVV YGSDADIGHH 180 LHERNDTGKA LIVTENASTR DNSNERSKLN LKEAYIEEMI CMFDRDVGDK QEEDRTYIFD 240 LSDFEMLKKN SGTGGSNEVT AMDETCTDHD DSLLGLINEA GSVDKSPVAK DAVTAAISLD 300 ASKFDGSQIN NPSETKVQNT ASPSHEGLCI CKTSGHLFPK AALKPEENEN ISNISNRAIN 360 KCPTADRSES LSGNEVVISG KEHDLIDDSC QSANKKNSEI SEPFDKMMKA IKIESAELTS 420 DPSSQKIIPQ INGESVKVVN PVGSKISNMI RTENDSAVPV VKSEPVDPVI TLPISSSFSC 480 QELPMGLPIR MTYRGRPKTD RRVVYLRDPV MRLWPVLYIE RNYFKTLASG WEAFSKANNI 540 QPGDECVIGI ENGVEGICSV QIISKREI

Sequence ? help Back to Top

Protein Sequence Length: 568 aa Download sequence

MDGKVACVEC TQKCLLDHGN KKKASPDVAS FFKVMIGDRF SKLLFLPPKF APTVSALVNQ  60
KAVLEDSLGL QWEVIISRIN GSLSLKQGWN AFSLDHDLKI GEFLIFNYIS SSHFIVKIYD  120
KSGCEKLNFP EAINQKKRTR DNRKYTFKAG PSHTIDRSSM NKRDSRTSVV YGSDADIGHH  180
LHERNDTGKA LIVTENASTR DNSNERSKLN LKEAYIEEMI CMFDRDVGDK QEEDRTYIFD  240
LSDFEMLKKN SGTGGSNEVT AMDETCTDHD DSLLGLINEA GSVDKSPVAK DAVTAAISLD  300
ASKFDGSQIN NPSETKVQNT ASPSHEGLCI CKTSGHLFPK AALKPEENEN ISNISNRAIN  360
KCPTADRSES LSGNEVVISG KEHDLIDDSC QSANKKNSEI SEPFDKMMKA IKIESAELTS  420
DPSSQKIIPQ INGESVKVVN PVGSKISNMI RTENDSAVPV VKSEPVDPVI TLPISSSFSC  480
QELPMGLPIR MTYRGRPKTD RRVVYLRDPV MRLWPVLYIE RNYFKTLASG WEAFSKANNI  540
QPGDECVIGI ENGVEGICSV QIISKREI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18960.1	8e-12	B3 family protein