PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1221240.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | SBP | ||||||||
Protein Properties | Length: 484aa MW: 52817.7 Da PI: 7.4344 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 132.8 | 1.1e-41 | 110 | 185 | 2 | 77 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 Cqv gC++dls+ k+yh+rhkvCe+hsk+++v+v+g+eqrfCqqCsrfh l efD++krsCr+rLa+hnerrrk+q Pd.00g1221240.m01 110 CQVYGCDKDLSSSKDYHKRHKVCEAHSKTAKVIVNGREQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQ 185 **************************************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 484 aa Download sequence |
MMGKHFSNNP SRDVLSGKVY GERSTNTISM ATPNLFSAED VSSSKLSSSI VDSNSRDSSL 60 IDLKLGRLAD NRDFHDSKFS EGHPILSSSE SSTPPKRMRV SGSYSQTAYC QVYGCDKDLS 120 SSKDYHKRHK VCEAHSKTAK VIVNGREQRF CQQCSRFHLL AEFDDGKRSC RKRLAGHNER 180 RRKPQVGIHS GRAGSRFQDN MLTTASFICQ EILPSGILDA ENYGTNDWCR HIKVEDATHY 240 RPLSGVPVTN GHLPLKPVFP SYDIGKRYPP FHDNGTNPLT GNIIIENGSQ YSHDMRGLNS 300 GSHSMFHETT TLGSEDFNVF NTASTVHGLS GISDSGCALS LLSSQSQKSS SHLSGIPMAR 360 PPVMPVSHTN YRLVQSSENL IGGCSHASSS GVSNKLPSSG MNSGAGTHLG PILLSNGSDT 420 DDFGISDGIF QGSDFVNAKD CLSCEDGTTI DLLQLSSQLQ RVEDQRQSME VKQESDAFCC 480 LRIT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69170.1 | 3e-47 | SBP family protein |