PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1213940.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | B3 | ||||||||
Protein Properties | Length: 226aa MW: 25555.6 Da PI: 5.632 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 57 | 3.6e-18 | 25 | 114 | 4 | 99 |
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 +++ d+++ l++pk+f++++++ s + l+ +sg +Wev++ + ++g+++l kGW eF k L++g ++vFk+dg+s+f v Pd.00g1213940.m01 25 KMILDDTSRDTKLRIPKSFVKKYEKH--LSNPVHLKLPSGSEWEVEV--TTCDGEVWLDKGWPEFSKFYSLEQGGSLVFKYDGNSKF--QVC 110 566678888899***********844..7788***************..**********************************9999..888 PP EE-S CS B3 96 vfrk 99 ++++ Pd.00g1213940.m01 111 ILDA 114 8776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence |
MSASLRQKID HEWPAFSATT PLFLKMILDD TSRDTKLRIP KSFVKKYEKH LSNPVHLKLP 60 SGSEWEVEVT TCDGEVWLDK GWPEFSKFYS LEQGGSLVFK YDGNSKFQVC ILDASGTEID 120 YPLALPVMEE TNEDDENKSV EILEDYDDEN DNSAEFFGDY QPCPKTRQKS GPLSCPLPRK 180 KTRLSTHSSP EISSSSSKRV VEAANKFISN HSFRVTGHIP YAGKAH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18990.1 | 7e-24 | B3 family protein |