PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g1213510.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 391aa MW: 44399.7 Da PI: 9.1534 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 56.7 | 4.5e-18 | 10 | 99 | 3 | 98 |
EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 +l+ s++l+ ++l++p +f+++ g + s+ tl ++g++W+v + +k ++++++ +GW+eF + +++g f++F+++g+s+f +v++ Pd.00g1213510.m01 10 HKLILSSTLQAKQLMIPENFVKKLGDD--LSTVATLSVPDGNVWRVGI--KKADNKFWFHDGWQEFIERYSIRVGYFLTFRYEGHSSF--TVHI 97 5677789999999***********988..88999999***********..**********************************9999..8888 PP E- CS B3 97 fr 98 f+ Pd.00g1213510.m01 98 FN 99 85 PP | |||||||
2 | B3 | 59.2 | 7.5e-19 | 277 | 366 | 4 | 97 |
E-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 4 vltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 vl ps+ + ++++lp fae++ +g++ ++l++++gr+W v++ yr+++ l++GW eF +n+L egD++vF+l + +e l+v Pd.00g1213510.m01 277 VLRPSYLYRGCIMYLPSCFAEKNlNGVSG---FIKLQSSDGRQWPVRCLYRGGR--AKLSQGWYEFTLENNLGEGDVCVFELLKMKEVVLKV 363 78899******************877743...5***************665555..66***********************98877776777 PP EEE CS B3 95 kvf 97 +vf Pd.00g1213510.m01 364 TVF 366 765 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 391 aa Download sequence |
MKNMIRPCFH KLILSSTLQA KQLMIPENFV KKLGDDLSTV ATLSVPDGNV WRVGIKKADN 60 KFWFHDGWQE FIERYSIRVG YFLTFRYEGH SSFTVHIFNL TTAEINYQPN ALSSTGGSVY 120 RHQVFEEMED DDSVEILGSS PKSIVTDSLR DKLFGDCATQ LIPGKDYNPP ALQNLFNGSK 180 PKNCTNWPDA GNPHPSKGSG LQAGEDIRSM KKTMRKKRKL DPTVQESSSQ HEKEVEIRFR 240 FYESASARKR TVTAEERERA INAAKTFEPV NPFCRVVLRP SYLYRGCIMY LPSCFAEKNL 300 NGVSGFIKLQ SSDGRQWPVR CLYRGGRAKL SQGWYEFTLE NNLGEGDVCV FELLKMKEVV 360 LKVTVFCVVE AAGFVNQPPQ QNASQAKMIR N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G18990.1 | 1e-137 | B3 family protein |