PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1210820.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NF-YA
Protein Properties Length: 351aa    MW: 38081.4 Da    PI: 7.9728
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1210820.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.63.6e-32175231158
          CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                        +ep+YVNaKQyq+Il+RRq+Rak+e e+kl +k rkpylheSRh+hA+rR+Rg+gGrF
  Pd.00g1210820.m01 175 QEPVYVNAKQYQGILRRRQARAKAELERKL-IKVRKPYLHESRHQHAMRRARGTGGRF 231
                        69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MQSKSETENR LHADHHTIPP NSVYSEPWWR GVGYNPISPA VTGRNASNSS SLECPNGGSE  60
SNDDRSLSND EPNEGDDDDA TKDSQITSPR SAGNDGQERQ NVPHVGSTVP TVRDDCLAQP  120
PQLELVGHSI ACASNPYQDP YYAGMMAAYG HQPLGYPPFL GMPHARMPLP LEMAQEPVYV  180
NAKQYQGILR RRQARAKAEL ERKLIKVRKP YLHESRHQHA MRRARGTGGR FAKKTNGDKS  240
NSTGQKKGTG SGPAHSSQSG SSSGSEPFPS DSAETWNSSN SQQEGRGSQV HDVYSAHNYA  300
NGSGCFQTHG GLQASMYPSY SGKRGEEGDC TGQQRGSISS NQASQRRLAI Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.11e-85NF-YA family protein