PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1210560.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 142aa MW: 16199.4 Da PI: 8.1852 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 67.6 | 3.4e-21 | 10 | 112 | 1 | 98 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 lp+Gf+F+P+d++l+ +yL +kv+g+++ ++vi+e+d+y k+ePwd+ + + a+ +++yfF+k ++ + +++r+ r++ sg+Wk Pd.00g1210560.m01 10 LPVGFKFRPRDDQLLGYYLLNKVRGTSFMYDNVIPEMDLYgKIEPWDIWHeyggHNLAKGEDLYFFTKLKSLSDKDSRAARTIGSGTWKGEN 101 79**************************99999*****99568*****742444222366799**************************999 PP NAM 88 kdkevlskkge 98 + ++v + +++ Pd.00g1210560.m01 102 SGTTVSDPENK 112 98888886333 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 142 aa Download sequence |
MAPCESAVNL PVGFKFRPRD DQLLGYYLLN KVRGTSFMYD NVIPEMDLYG KIEPWDIWHE 60 YGGHNLAKGE DLYFFTKLKS LSDKDSRAAR TIGSGTWKGE NSGTTVSDPE NKENDLVYNG 120 RVCMFMKISQ TSKSRRPVQM IS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62380.1 | 1e-15 | NAC family protein |