PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1209000.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

GeBP

Protein Properties

Length: 620aa MW: 69155.1 Da PI: 10.0721

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1209000.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	105.7	3.6e-33	138	230	1	97
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifels 92 klfqr+ws++Dei++L+G+id+ +k+ +p++d+ af++f+kks++++v+k+ql +Kirr+KkK++++v+k gk+ + k+h+qk f+ls Pd.00g1209000.m01 138 KLFQRIWSDDDEITILKGMIDYSTKKA-DPYSDMGAFHDFIKKSLKADVNKTQLQDKIRRIKKKYETNVAK---GKKYNPVKPHEQKLFDLS 225 579*****************66665.***************************************...999999******** PP DUF573 93 kkiWg 97 kk+W Pd.00g1209000.m01 226 KKVWV 230 **6 PP

Sequence ? help Back to Top
Protein Sequence Length: 620 aa Download sequence
MAPKRPSPLD EPPAASSSEE EAAPTPVAAK KPDSATVNSK PQSSSSGSES ESESDSELGK 60 DRVVKPIVSK PMEETPKTKK PRSKASAITT PAARAGLKRP SESDPKDSKR PKKKVTDPDQ 120 EREHAGEEKK SGGDDSKKLF QRIWSDDDEI TILKGMIDYS TKKADPYSDM GAFHDFIKKS 180 LKADVNKTQL QDKIRRIKKK YETNVAKGKK YNPVKPHEQK LFDLSKKVWV SGEGSIGLSG 240 LSEQSKSNGK ARTNQKGNKT LASLKAELLS SPERPKECEK VEFGLKPSGS ESLNEVIGFD 300 KGFRELGLPE GVVKQGLELI GGAKRAELKE KWKKLHVAEL ELFVKKSELM RDQAKPGAFG 360 AVTLPFSVRE GINIFLSGFI PTENPRFRDE SLTFKVETPQ ESGEEIETYA RYRYPSMTKT 420 LREFKLQVIE GEFTNSQIIV MLGENGSGKT TFMRMLVGLS KPDFGVEIPE LHVSYKNQKI 480 NPRRATKVKD LLHEKIRDSC TDPQFVTDVM KPLQIEQLMD QQITKLSGGE LQRVALCVCL 540 GKTKLLSMKE SHQLIVLQIL RSLLTGMNLF LSQLDITFRR WDSTKPQPPN GKVVQSFRGQ 600 GIDRYALVNI NNNPRSFATF

Sequence ? help Back to Top

Protein Sequence Length: 620 aa Download sequence

MAPKRPSPLD EPPAASSSEE EAAPTPVAAK KPDSATVNSK PQSSSSGSES ESESDSELGK  60
DRVVKPIVSK PMEETPKTKK PRSKASAITT PAARAGLKRP SESDPKDSKR PKKKVTDPDQ  120
EREHAGEEKK SGGDDSKKLF QRIWSDDDEI TILKGMIDYS TKKADPYSDM GAFHDFIKKS  180
LKADVNKTQL QDKIRRIKKK YETNVAKGKK YNPVKPHEQK LFDLSKKVWV SGEGSIGLSG  240
LSEQSKSNGK ARTNQKGNKT LASLKAELLS SPERPKECEK VEFGLKPSGS ESLNEVIGFD  300
KGFRELGLPE GVVKQGLELI GGAKRAELKE KWKKLHVAEL ELFVKKSELM RDQAKPGAFG  360
AVTLPFSVRE GINIFLSGFI PTENPRFRDE SLTFKVETPQ ESGEEIETYA RYRYPSMTKT  420
LREFKLQVIE GEFTNSQIIV MLGENGSGKT TFMRMLVGLS KPDFGVEIPE LHVSYKNQKI  480
NPRRATKVKD LLHEKIRDSC TDPQFVTDVM KPLQIEQLMD QQITKLSGGE LQRVALCVCL  540
GKTKLLSMKE SHQLIVLQIL RSLLTGMNLF LSQLDITFRR WDSTKPQPPN GKVVQSFRGQ  600
GIDRYALVNI NNNPRSFATF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25210.1	3e-25	GeBP family protein