PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1203590.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GATA
Protein Properties Length: 362aa    MW: 39659.2 Da    PI: 4.7605
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1203590.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA47.62.2e-15199235135
               GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                        C++Cg ++  Tp +Rrgp g+++LCnaCGl+++ kg+
  Pd.00g1203590.m02 199 CQHCGISEksTPAMRRGPAGPRSLCNACGLMWANKGT 235
                        *****99999************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    
MEMVNAQLLQ ARAYEGEDQL VHIPAELEGD YDEGGGAKAA MNGGDQARRS SGVTMSRCNS  60
ALPSRASELT IAFEGEVHVF PAVTPDKVQA VLLLLGGRDI SSSFPSSESL LESNSGGIGD  120
ISRNSKLSRR TASLVRFREK RKERCFEKKI RYTCRKEVAQ RMYRKNGQFA SLKDDSKIAS  180
GNCDSSDGTS CPESVLRRCQ HCGISEKSTP AMRRGPAGPR SLCNACGLMW ANKGTLRDLT  240
KAGRPIHFDQ NELETAADFK PLMLKPENAH LDPDEEGSPE ESKPIALDTE NPPLRLGDED  300
MLETAEAATN HISIQMENST VNFDEQENLD EFCNASGTEF EIPANFDEQV SIFSSLTSHM  360
AD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.22e-48GATA family protein