PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1203590.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GATA
Protein Properties Length: 359aa    MW: 39233.6 Da    PI: 4.6571
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1203590.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA47.62.2e-15196232135
               GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                        C++Cg ++  Tp +Rrgp g+++LCnaCGl+++ kg+
  Pd.00g1203590.m01 196 CQHCGISEksTPAMRRGPAGPRSLCNACGLMWANKGT 232
                        *****99999************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    
MEMVNAQLLQ ARAYEGEDQL VHIPAELEGD YDEGGGAKAA MNGGDQARRS SGVTMSRCNS  60
ALPSRASELT IAFEGEVHVF PAVTPDKVQA VLLLLGGRDI SSSFPSSESL LESNSGGIGD  120
ISRNSKLSRR TASLVRFREK RKERCFEKKI RYTCRKEVAQ RMYRKNGQFA SLKDDSKIAS  180
GNCDSSDGTS CPESVCQHCG ISEKSTPAMR RGPAGPRSLC NACGLMWANK GTLRDLTKAG  240
RPIHFDQNEL ETAADFKPLM LKPENAHLDP DEEGSPEESK PIALDTENPP LRLGDEDMLE  300
TAEAATNHIS IQMENSTVNF DEQENLDEFC NASGTEFEIP ANFDEQVSIF SSLTSHMAD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.21e-50GATA family protein