PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1200570.m03
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 544aa    MW: 61223.4 Da    PI: 6.6681
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1200570.m03genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS451.36.3e-1381685381374
               GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92 
                        l+++L+ cA+av+++dl laq+++ +l++++s +g+p+qRl ay++e+L ar a+s+s++ykal+++e +   sse l+++++++ev+P++k
  Pd.00g1200570.m03 168 LKQVLIFCAKAVADNDLLLAQWMMDELRQMVSVSGEPIQRLGAYLLEGLVARRASSGSNIYKALRCKEPA---SSELLSYMHILYEVCPYFK 256
                        5799*****************************************************************9...9****************** PP

               GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlv 182
                        f+++ aN aI ea++ e+rvHiiDf+i+qG QW++L+qa+a+Rp+gpp++RiTg++++ s   +   l+ +g+rL+k+Ae ++vpfef++ +
  Pd.00g1200570.m03 257 FGYMSANGAIAEAMKDENRVHIIDFQIGQGSQWLTLIQAFAARPGGPPHIRITGIDDSMSAyaRGGGLNIVGKRLSKLAELFKVPFEFHA-A 347
                        *********************************************************888789999************************.8 PP

               GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak 274
                        a +  +++l++L v+pgEala n++++lh+++desvs++++rd++L+lvkslsPkvv++veqe+++n++ F+ rf+e+l+yy+a+f+s++++
  Pd.00g1200570.m03 348 AMSGCEVQLKHLGVRPGEALAMNFAFMLHHMPDESVSTQNHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFVETLNYYTAMFESIDVT 439
                        9999**************************************************************************************** PP

               GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrp 366
                        lpr+++eri+vE+++l+re+vn++aceg er+erhe l+kW+ r+ +aGF+p+pls+ +++++k+ll ++++  yr++e++g+l+lgWk+r 
  Pd.00g1200570.m03 440 LPRDHKERINVEQHCLAREVVNIIACEGVERVERHELLGKWKLRFAMAGFTPYPLSSLVNSTIKTLLDNYSD-KYRLQERDGALYLGWKNRD 530
                        ***********************************************************************5.5****************** PP

               GRAS 367 LvsvSaWr 374
                        Lv+ +aW+
  Pd.00g1200570.m03 531 LVASCAWK 538
                        *******8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 544 aa     Download sequence    
MSNRLYYQPV QEVEAYCLPR FQTLDPQVHY NNESSQSTVF SAQNFHIKYC TLESSAANGS  60
YTVYNSPSTV NFSPNGSLMS QQDSHSYPPP DQYHSPDQNY SSPISGSCIT DDATDFKYKL  120
KQLETVMLGP DSNILDNYCS TFQNGTSNNL PETDSWGQIM DSISKRDLKQ VLIFCAKAVA  180
DNDLLLAQWM MDELRQMVSV SGEPIQRLGA YLLEGLVARR ASSGSNIYKA LRCKEPASSE  240
LLSYMHILYE VCPYFKFGYM SANGAIAEAM KDENRVHIID FQIGQGSQWL TLIQAFAARP  300
GGPPHIRITG IDDSMSAYAR GGGLNIVGKR LSKLAELFKV PFEFHAAAMS GCEVQLKHLG  360
VRPGEALAMN FAFMLHHMPD ESVSTQNHRD RLLRLVKSLS PKVVTLVEQE SNTNTAAFFP  420
RFVETLNYYT AMFESIDVTL PRDHKERINV EQHCLAREVV NIIACEGVER VERHELLGKW  480
KLRFAMAGFT PYPLSSLVNS TIKTLLDNYS DKYRLQERDG ALYLGWKNRD LVASCAWKCK  540
PSTN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein