PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1200170.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NF-YB

Protein Properties

Length: 213aa MW: 22566.9 Da PI: 6.6256

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1200170.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	171	1.4e-53	59	146	2	89
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkk 89 reqdrflPianvsrimkk+lPanakiskdaketvqecvsefisfvt+easdkcqrekrktingddllwa++tlGfe+yveplkvyl++ Pd.00g1200170.m01 59 REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQN 146 89************************************************************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 213 aa Download sequence
MHYYPSRSNG PQHLCLSSLI ALRRSPSETP KTPDMADSDN DSGGNNDSSQ AQSGELSARE 60 QDRFLPIANV SRIMKKALPA NAKISKDAKE TVQECVSEFI SFVTGEASDK CQREKRKTIN 120 GDDLLWAMTT LGFEEYVEPL KVYLQNSGSS GGGGGYNGVY GGMVMMGNHH QGHVYGSGGG 180 YQQHHMDMGS GGVRVGNSGG SGDGGNGGAS VVR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14540.1	1e-61	NF-YB family protein