PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1199250.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 446aa    MW: 48578 Da    PI: 5.8041
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1199250.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3759.7e-115844433374
               GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                         lLl+cAe+v+ ++l +a+ lL ++ el+sp g++ +R+ ayf+ AL++r+ +s+ ++y+ l++++ +  +s++ ++al+ ++ +sP++kfs
  Pd.00g1199250.m01  84 GLLLQCAECVAMDSLDEASDLLPEIAELSSPFGSSPERVGAYFAHALQTRVISSCLGTYSPLTTKTLTLAQSQRIFNALQSYNSISPLVKFS 175
                        58******************************************************************99********************** PP

               GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrl 186
                        h+t NqaI +a++ge++vH+iD+di+qGlQWp L++ LasR+++  s+RiTg+gs    s+e le+tg+rLa+fA++lg+pfef++l  k  
  Pd.00g1199250.m01 176 HFTSNQAIFQALDGEDHVHVIDLDIMQGLQWPGLFHILASRSKKIRSMRITGFGS----SSELLESTGRRLADFASSLGLPFEFRPLEGKIG 263
                        *******************************************************....9**************************988888 PP

               GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                        +  el++L v+p+Ea++V++++  h l+d ++s       +L+l+ sl+Pk+++++eq+++h s+sFl rf+eal+yysalfd+l  +l+++
  Pd.00g1199250.m01 264 SITELSQLGVRPDEATVVHWMH--HCLYDVTGSDLA----TLRLLGSLRPKLITIAEQDLSH-SGSFLGRFVEALHYYSALFDALGDGLGAD 348
                        999******************9..888877777777....**********************.899************************** PP

               GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                        s er++vE++l+g ei+n++a  g +r+ + + +e+W + l+++GF+pv+l+ + a+qa+lll +++++gy++ ee+g+l lgWkd +L+++
  Pd.00g1199250.m01 349 SLERHMVEQQLFGCEIRNILAVGGPKRTGEVK-VERWGDELKRVGFRPVSLGGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKDLSLLTA 439
                        **************************998887.9********************************************************** PP

               GRAS 371 SaWr 374
                        SaW+
  Pd.00g1199250.m01 440 SAWQ 443
                        ***6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 446 aa     Download sequence    
MLQSLVPQSP IGAANPNNNP SPSSSSMKTK RVDRDLAGGE SSGEDPSFTK RPNSGRNFSR  60
EKTSDERETE PVAEGESAGL RLLGLLLQCA ECVAMDSLDE ASDLLPEIAE LSSPFGSSPE  120
RVGAYFAHAL QTRVISSCLG TYSPLTTKTL TLAQSQRIFN ALQSYNSISP LVKFSHFTSN  180
QAIFQALDGE DHVHVIDLDI MQGLQWPGLF HILASRSKKI RSMRITGFGS SSELLESTGR  240
RLADFASSLG LPFEFRPLEG KIGSITELSQ LGVRPDEATV VHWMHHCLYD VTGSDLATLR  300
LLGSLRPKLI TIAEQDLSHS GSFLGRFVEA LHYYSALFDA LGDGLGADSL ERHMVEQQLF  360
GCEIRNILAV GGPKRTGEVK VERWGDELKR VGFRPVSLGG NPAAQASLLL GMFPWKGYTL  420
VEENGCLKLG WKDLSLLTAS AWQPLD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41920.10.0GRAS family protein