PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1194170.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 279aa    MW: 31627.9 Da    PI: 4.7895
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1194170.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.91.8e-161461148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
    Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                       +g WT+eEd +l+ +v+++G  +W+  +r  g+ R++k+c++rw +yl
  Pd.00g1194170.m01 14 KGTWTPEEDRKLIAYVTRYGCWNWRQLPRFAGLSRCGKSCRLRWMNYL 61
                       799*****************99************************97 PP
2Myb_DNA-binding58.81.2e-1867111147
                        TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
    Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                        rg+ ++eE+e ++++++qlG++ W++Ia+ ++ gRt++++k++w++ 
  Pd.00g1194170.m01  67 RGNYSQEEEETIIKLHQQLGNR-WSAIAAQLP-GRTDNEIKNHWHTN 111
                        899*******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MVRTPCRDEN GMKKGTWTPE EDRKLIAYVT RYGCWNWRQL PRFAGLSRCG KSCRLRWMNY  60
LRPNIKRGNY SQEEEETIIK LHQQLGNRWS AIAAQLPGRT DNEIKNHWHT NLKKRMNNKH  120
YNASSSSSSS SSSSSSSVTQ TDDQETPNCS GLVELAVDQL TKNATILPNA DETADHLQVP  180
QTDHDILDNI FQLSSPQPSS SEVSSLTTDN AAVVLSSVNN DNWVNYVEED NVISSMEAFA  240
DVQFGDDFWT EPFLADTSYI PCGLSTLSMD SEFFYPPFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28110.14e-58MYB family protein