PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g119290.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 284aa MW: 32177.2 Da PI: 9.2079

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g119290.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.3	1.3e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed l d+++ +G g W++I+++ g++R++k+c++rw++yl Pd.00g119290.m01 14 RGAWTALEDRTLTDYIRTHGEGKWRKIPKEAGLKRCGKSCRLRWLNYL 61 89********************************************97 PP
2	Myb_DNA-binding	54.2	3.2e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ T+eE++l+++++k+lG++ W++Ia +++ gRt++++k++w++ Pd.00g119290.m01 67 RGNITQEEEDLIIRLHKLLGNR-WSLIAGRIP-GRTDNEIKNYWNTT 111 7999****************.*****.**********87 PP

Sequence ? help Back to Top
Protein Sequence Length: 284 aa Download sequence
MGRTPCCSKV GLNRGAWTAL EDRTLTDYIR THGEGKWRKI PKEAGLKRCG KSCRLRWLNY 60 LRPDIKRGNI TQEEEDLIIR LHKLLGNRWS LIAGRIPGRT DNEIKNYWNT TLGKKVNCTD 120 QQTKQSSGAV NDNTKKKRNK STKLPTSTDK TQPSTNIAVR TKALRFNKVL VTPPAQQEAI 180 FPHHADGNHG DLVAKKKAAA ANYYSSEQED TTASEDLMLD FDVGELLMSG INNPDSEFWK 240 ICHQLDDNNG GSKNYKWASS HHAPLLFSEE MLKDWVGDDD CFHH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22640.1	1e-63	MYB family protein