PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1191490.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 1369aa MW: 154836 Da PI: 6.3446

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1191490.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	76.4	5.8e-24	748	839	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHel 89 ++Y+++A++ GFs+rk++s++s++ g i++r+fvC+++g+++++kk+++++ r+r++ r+gC+akl ++ke +w+v+++++ HnHel Pd.00g1191490.m01 748 EYYSNFARKNGFSIRKARSTESQNLG-IYRRDFVCYRSGFNQPRKKANVEHPRERKSVRCGCDAKLYLTKEIvdgVMQWYVSQFSNVHNHEL 838 69******************8888.**************************************998766779***********9 PP FAR1 90 a 90 Pd.00g1191490.m01 839 L 839 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 1369 aa Download sequence
MVRCFLLFTP SHPCRRVPRR SNHAFSTFTA SSPVVSDPPP PHASLFFKSQ NPTPPLIPLQ 60 SSFDQYESSQ PQLKAPPFSP HFTHTNNGTY GYLSSRYRDS RTSNDAQSFH LQICKHGFAN 120 DLFLCNTLIN VYVRIGALVE AGKLFEEMPE KNSVTWACLI SGYTQNGMPN EACAHFKQMV 180 SHGFSPSPYA CGSVLRACQE SGPCKLKFGM QIHGLICKTN HASDMVMSNV LMSMYGRCLG 240 SVDDAYHVFC EIEIKNSVSW NSIISVYCQR GDAISAFKLF SSMQKDGSAF SLQPNEYTFG 300 SLITAACSLA HAGSALVSGF ARFGLIDYAR KIFEQMSERN AVSMNGLMVA LVRQKRGKEA 360 TEVFMEMKGL VGINLDSLVV LLSSFAEFSV LEEGKRKGRE NEFFEDAVMN FREMKRSEFL 420 PSNFTLISAL SSCASLGWII LGQQIHCEAL KLGLDLDVSV SNALLALYSD TGHLSECRNV 480 FFSMQDYDQV SWNSIIGALA GSEASVLEAV EYFLDMMQSG WELNRVTFMS ILAAVSSLSL 540 PDLGQQIHAV VLKYNAAEDC AIENALITCY GKCGGIDDCE KIFSRMSERR DEISWNSMIS 600 GYIHNEFLPK AMDLVWFMMQ RGQRLDSFTF ATVLSACASV ATLERERDDE EPKARRRETR 660 RVYIFARISL SGICSVTPHC LAQNNLNHLR ATFTGYISWN TSCYEGDDLG SVSSQHVKSE 720 TTPSSSSSEA VFTPYVGQIF KTDDDAFEYY SNFARKNGFS IRKARSTESQ NLGIYRRDFV 780 CYRSGFNQPR KKANVEHPRE RKSVRCGCDA KLYLTKEIVD GVMQWYVSQF SNVHNHELLE 840 DDQVRLLPAY RKIQEVDQER ILLLSKAGFP VNRIVKVLEL EKGVQPGQLP FIEKDVRNFV 900 RTCKKTVQEN DALLNEKREN DMLELLEACK AMTGRDPDFV YDYTIDENDK VENIAWSFGD 960 SIRAYTIFGD VVAFDTSHRS VTYGLLLGVW FGIDNHGKAI FLGCVLLQDE SSHSFAWALQ 1020 AFMRFMRGRH PQTILTDIDS GLRDAIATEL PNTKHVLCIW HILSKISSWF SLPLGSQYEN 1080 FKTEFDMLSQ LESVEDFEHQ WNILVAQFGL VSDKHIALLY SYRASWTFSY IRSYFLARTL 1140 TAEFSLSLES FLKRILNGQT CLQVFFEQVS IAANLENQTR EGMQYMHVKT GMPLEEHARN 1200 ILTPYAFNVL QHEIVLSVQY ATTEMANGSY LVRHYKKLDG ECLVIWMPDD EQIHCSCKEF 1260 EHSGILCRHS LRVLVVKNYF QLPEKYFLLR WRVESSLVSV DDQNAQISSD DCAQAFQSLT 1320 ASLLTESLIS KNRFNYVHNE LTSLLEHVRN MPVIDENAAN AAANNISES

Sequence ? help Back to Top

Protein Sequence Length: 1369 aa Download sequence

MVRCFLLFTP SHPCRRVPRR SNHAFSTFTA SSPVVSDPPP PHASLFFKSQ NPTPPLIPLQ  60
SSFDQYESSQ PQLKAPPFSP HFTHTNNGTY GYLSSRYRDS RTSNDAQSFH LQICKHGFAN  120
DLFLCNTLIN VYVRIGALVE AGKLFEEMPE KNSVTWACLI SGYTQNGMPN EACAHFKQMV  180
SHGFSPSPYA CGSVLRACQE SGPCKLKFGM QIHGLICKTN HASDMVMSNV LMSMYGRCLG  240
SVDDAYHVFC EIEIKNSVSW NSIISVYCQR GDAISAFKLF SSMQKDGSAF SLQPNEYTFG  300
SLITAACSLA HAGSALVSGF ARFGLIDYAR KIFEQMSERN AVSMNGLMVA LVRQKRGKEA  360
TEVFMEMKGL VGINLDSLVV LLSSFAEFSV LEEGKRKGRE NEFFEDAVMN FREMKRSEFL  420
PSNFTLISAL SSCASLGWII LGQQIHCEAL KLGLDLDVSV SNALLALYSD TGHLSECRNV  480
FFSMQDYDQV SWNSIIGALA GSEASVLEAV EYFLDMMQSG WELNRVTFMS ILAAVSSLSL  540
PDLGQQIHAV VLKYNAAEDC AIENALITCY GKCGGIDDCE KIFSRMSERR DEISWNSMIS  600
GYIHNEFLPK AMDLVWFMMQ RGQRLDSFTF ATVLSACASV ATLERERDDE EPKARRRETR  660
RVYIFARISL SGICSVTPHC LAQNNLNHLR ATFTGYISWN TSCYEGDDLG SVSSQHVKSE  720
TTPSSSSSEA VFTPYVGQIF KTDDDAFEYY SNFARKNGFS IRKARSTESQ NLGIYRRDFV  780
CYRSGFNQPR KKANVEHPRE RKSVRCGCDA KLYLTKEIVD GVMQWYVSQF SNVHNHELLE  840
DDQVRLLPAY RKIQEVDQER ILLLSKAGFP VNRIVKVLEL EKGVQPGQLP FIEKDVRNFV  900
RTCKKTVQEN DALLNEKREN DMLELLEACK AMTGRDPDFV YDYTIDENDK VENIAWSFGD  960
SIRAYTIFGD VVAFDTSHRS VTYGLLLGVW FGIDNHGKAI FLGCVLLQDE SSHSFAWALQ  1020
AFMRFMRGRH PQTILTDIDS GLRDAIATEL PNTKHVLCIW HILSKISSWF SLPLGSQYEN  1080
FKTEFDMLSQ LESVEDFEHQ WNILVAQFGL VSDKHIALLY SYRASWTFSY IRSYFLARTL  1140
TAEFSLSLES FLKRILNGQT CLQVFFEQVS IAANLENQTR EGMQYMHVKT GMPLEEHARN  1200
ILTPYAFNVL QHEIVLSVQY ATTEMANGSY LVRHYKKLDG ECLVIWMPDD EQIHCSCKEF  1260
EHSGILCRHS LRVLVVKNYF QLPEKYFLLR WRVESSLVSV DDQNAQISSD DCAQAFQSLT  1320
ASLLTESLIS KNRFNYVHNE LTSLLEHVRN MPVIDENAAN AAANNISES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	0.0	FAR1 family protein