PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1186850.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 382aa MW: 42517.1 Da PI: 8.3973

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1186850.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.3	8.5e-34	30	84	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wtp+LHerF+eav+qLGG++kAtPkt+++lm+++gLtl+h+kSHLQkYRl Pd.00g1186850.m02 30 KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL 84 79****************************************************8 PP
2	Myb_DNA-binding	66	6.9e-21	32	83	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT++++e++++av+qlGg t+kt+++ mg g+tl+++ks++qky+ Pd.00g1186850.m02 32 RLKWTPDLHERFIEAVNQLGGAdkaTPKTVMKLMGiPGLTLYHLKSHLQKYR 83 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MSIPPERHLF LQGDQNGPGD SGLVLSTDAK PRLKWTPDLH ERFIEAVNQL GGADKATPKT 60 VMKLMGIPGL TLYHLKSHLQ KYRLSKNLHG HATSGTSKIV PVAAERLSEA NGTHMSNMST 120 GPQANKGLHI SETLQMQIEV QRRLHEQLEV QRHLQLRIEA QGKYLQSVLE KAQETLGRQN 180 LGTVGLEAAK VQLSELVSKV STQCLNSAFT ELKELQGLCP QQTQTTQPTD CSMESCLTSC 240 EGSKKDQEIH NSAMGLRANY NGRELLDEKE PMLQKTELKW CEELKENNML LSSISNDAAK 300 RMFPVERRSS DLSMSIGCQG ERWNIDSNGN SEERLKGRST DGSFLDRTNN RADSAKAETE 360 KVSRGYRSIS ALLCSKTRPK YS

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MSIPPERHLF LQGDQNGPGD SGLVLSTDAK PRLKWTPDLH ERFIEAVNQL GGADKATPKT  60
VMKLMGIPGL TLYHLKSHLQ KYRLSKNLHG HATSGTSKIV PVAAERLSEA NGTHMSNMST  120
GPQANKGLHI SETLQMQIEV QRRLHEQLEV QRHLQLRIEA QGKYLQSVLE KAQETLGRQN  180
LGTVGLEAAK VQLSELVSKV STQCLNSAFT ELKELQGLCP QQTQTTQPTD CSMESCLTSC  240
EGSKKDQEIH NSAMGLRANY NGRELLDEKE PMLQKTELKW CEELKENNML LSSISNDAAK  300
RMFPVERRSS DLSMSIGCQG ERWNIDSNGN SEERLKGRST DGSFLDRTNN RADSAKAETE  360
KVSRGYRSIS ALLCSKTRPK YS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	1e-135	G2-like family protein