PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1186800.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GeBP
Protein Properties Length: 111aa    MW: 12976.5 Da    PI: 10.4821
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1186800.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57343.96.9e-143544498
             DUF573 44 sisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98
                        ++++v+k+ql  KirrLKkK++++++k    k+ +  k+h+ k+f+lskk+Wgs
  Pd.00g1186800.m01  3 LLKADVNKTQLQYKIRRLKKKYETNMAK---RKKYNTVKPHELKVFDLSKKVWGS 54
                       6899***********************9...7778899***************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 111 aa     Download sequence    
MNLLKADVNK TQLQYKIRRL KKKYETNMAK RKKYNTVKPH ELKVFDLSKK VWGSGEGFVV  60
SAGWRELGLL EGCLEFIGEP KLAELKKEWK KMHVAELELL VRMGVLMREQ A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G11510.13e-10GeBP family protein