PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1186360.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | B3 | ||||||||
Protein Properties | Length: 237aa MW: 26379.5 Da PI: 9.8849 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 43.1 | 7.5e-14 | 133 | 218 | 13 | 99 |
TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 + r+ +pk+ a + g++ ++ ++l+d++grsW+vkl+ + ++gr ++t+G + n++ gD++vF+l++rse v++fr+ Pd.00g1186360.m01 133 QYRMNIPKELAVAEGLI--GKERVMLKDPNGRSWNVKLRLdakEHHGGRLLMTQGLVACWQVNNISLGDTIVFELVKRSEM--EVHIFRT 218 56899******999888..4557***************99776777777*************************9986555..9999986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MARKPTKPSP KPPSFFKVLL GDDFPRQLCL PPAFMVHYNG PSHCKCALRG PTGKWWTVGL 60 EEREDGFYFH EGGSKFDVTI YHPMGCDMRR SIGNSVRPGK RPATAAAVEE TSTGSIVFRS 120 EHPCFMGILG KNQYRMNIPK ELAVAEGLIG KERVMLKDPN GRSWNVKLRL DAKEHHGGRL 180 LMTQGLVACW QVNNISLGDT IVFELVKRSE MEVHIFRTGA GGNMRSVVLD ASSSVKH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24700.1 | 8e-10 | B3 family protein |