PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1175300.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 464aa MW: 51247.5 Da PI: 6.5551

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1175300.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.1	3.2e-16	156	201	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+++G+ +W++Ia+++ gR++k+c++rw++ Pd.00g1175300.m01 156 RGHWRPAEDSKLKELVALYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 201 899***************************.*********996 PP
2	Myb_DNA-binding	54.1	3.5e-17	208	251	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T+eE+++l +a++ +G++ W+ Iar ++ gRt++ +k++w+ Pd.00g1175300.m01 208 RRAFTEEEEDRLMQAHRVYGNK-WAMIARLFP-GRTDNAVKNHWHV 251 678*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MANNGAIYVT ENPNAFSCFS SAPSFSSSSP SCSMGMVYAD MGSLSLSSNY GVVSSVSSQE 60 SSYISKLSEV ENGRGFWGFP PMGNCNNRSS EDYHHNTDIG DGKGSDSSSD HESGENNQTC 120 MNDQKANLIN HEKYPNENVV IGGKETESGQ SKHCARGHWR PAEDSKLKEL VALYGPQNWN 180 LIAEKLEGRS GKSCRLRWFN QLDPRINRRA FTEEEEDRLM QAHRVYGNKW AMIARLFPGR 240 TDNAVKNHWH VIMARKYREQ SSAYRRRKLS QTVYRRMEED PSFNVSRSTE PPSYCTLNLP 300 PNGGLSNSTL SPFPYGTSYN GVVGCGVDYY GSNGSPNMIS AEEEETIPSK KVLPFEFFPG 360 TKSNEGVMGM VSQSRSWDSS SDIEGHLCNL HPHHQPYMMA MQQANYHNLL HSYSDSSIPA 420 SPRQVSAGKP SPSAAAAADE DRVGGSHHET LPPPFIDFLG VGAT

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MANNGAIYVT ENPNAFSCFS SAPSFSSSSP SCSMGMVYAD MGSLSLSSNY GVVSSVSSQE  60
SSYISKLSEV ENGRGFWGFP PMGNCNNRSS EDYHHNTDIG DGKGSDSSSD HESGENNQTC  120
MNDQKANLIN HEKYPNENVV IGGKETESGQ SKHCARGHWR PAEDSKLKEL VALYGPQNWN  180
LIAEKLEGRS GKSCRLRWFN QLDPRINRRA FTEEEEDRLM QAHRVYGNKW AMIARLFPGR  240
TDNAVKNHWH VIMARKYREQ SSAYRRRKLS QTVYRRMEED PSFNVSRSTE PPSYCTLNLP  300
PNGGLSNSTL SPFPYGTSYN GVVGCGVDYY GSNGSPNMIS AEEEETIPSK KVLPFEFFPG  360
TKSNEGVMGM VSQSRSWDSS SDIEGHLCNL HPHHQPYMMA MQQANYHNLL HSYSDSSIPA  420
SPRQVSAGKP SPSAAAAADE DRVGGSHHET LPPPFIDFLG VGAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	2e-75	MYB family protein