PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1166590.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 665aa MW: 74840.3 Da PI: 5.64

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1166590.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	41.1	5.8e-13	64	138	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Y++Y+++vGFs+ + + + +k +g i++ +f Cs+e +++++ ++ C+a+l+++++ + w+ tk++++HnH+++ Pd.00g1166590.m01 64 LYDAYSRHVGFSTHVGQFSCTKPDGPIVTWDFACSREVFKRKNVES--------------CNAMLRIERKGANSWVATKFVEDHNHSMV 138 69************************************999877..............************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 665 aa Download sequence
MDTEVVVDVE GENMEHHMEE NTEPGEKQNV NQNFAGREMS IQDDGNTKPH VGMEFESEEA 60 AKTLYDAYSR HVGFSTHVGQ FSCTKPDGPI VTWDFACSRE VFKRKNVESC NAMLRIERKG 120 ANSWVATKFV EDHNHSMVSP SKVHYLRPRR HFAGATKNAA ETLDPTTDVY FATEGNVSYE 180 PNRGGQERLA HTYLAHPSLY GELYSCINFS ETIEDFESSW ASLLERYDLL RNDWLQAVYN 240 ARKQWAPVYF RGTFFAAIFS NQGVSSFFDG YVNQQTSIPL FFKQYERALE LSLEKEIEAD 300 YDTMCTTPVL KTPSPMEQQA ANLYTKKVFA KFQEELVETF VYTANKIEGD GLVSKYRVAK 360 YEHDDKAYIV TLNVSEMKAS CSCQMFEYSG ILCRHILTVF TVTNVLTLPP HYILKRWTRN 420 AKSGVGLDEQ SSENQGIETL NMRFNNLCRE AIKYAEEGAI AVETYNAAMS ALQEGGKKIS 480 VVKKNVAKVI PPSSQPSGNI QEDNMKKSPL PLGEMAPSLW PWQEALPHRF NLNDGGVPVA 540 DLNQPSMAPV SIHPDGAHPD NTVVLTCFKS MAWIIENKNS TSAGKVAVIN LKLQDYGKNP 600 AGETEVQFRL TRVTLEPMLR SMAYISQQLS APANRVAVIN LKLQDTKTTS GETEVNYDKS 660 SFILI

Sequence ? help Back to Top

Protein Sequence Length: 665 aa Download sequence

MDTEVVVDVE GENMEHHMEE NTEPGEKQNV NQNFAGREMS IQDDGNTKPH VGMEFESEEA  60
AKTLYDAYSR HVGFSTHVGQ FSCTKPDGPI VTWDFACSRE VFKRKNVESC NAMLRIERKG  120
ANSWVATKFV EDHNHSMVSP SKVHYLRPRR HFAGATKNAA ETLDPTTDVY FATEGNVSYE  180
PNRGGQERLA HTYLAHPSLY GELYSCINFS ETIEDFESSW ASLLERYDLL RNDWLQAVYN  240
ARKQWAPVYF RGTFFAAIFS NQGVSSFFDG YVNQQTSIPL FFKQYERALE LSLEKEIEAD  300
YDTMCTTPVL KTPSPMEQQA ANLYTKKVFA KFQEELVETF VYTANKIEGD GLVSKYRVAK  360
YEHDDKAYIV TLNVSEMKAS CSCQMFEYSG ILCRHILTVF TVTNVLTLPP HYILKRWTRN  420
AKSGVGLDEQ SSENQGIETL NMRFNNLCRE AIKYAEEGAI AVETYNAAMS ALQEGGKKIS  480
VVKKNVAKVI PPSSQPSGNI QEDNMKKSPL PLGEMAPSLW PWQEALPHRF NLNDGGVPVA  540
DLNQPSMAPV SIHPDGAHPD NTVVLTCFKS MAWIIENKNS TSAGKVAVIN LKLQDYGKNP  600
AGETEVQFRL TRVTLEPMLR SMAYISQQLS APANRVAVIN LKLQDTKTTS GETEVNYDKS  660
SFILI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	0.0	FAR1 family protein