PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1166550.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | AP2 | ||||||||
Protein Properties | Length: 377aa MW: 42780.4 Da PI: 6.5207 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 48.9 | 1.6e-15 | 69 | 128 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d s+n+ k+ ++++lg ++++e Aa ++ a++k++g Pd.00g1166550.m01 69 SIYRGVTRHRWTGRFEAHLWDkSSWNNiqnKKgRQVYLGAYDSEEAAAHTYDLAALKYWG 128 57*******************777799977447*************************98 PP | |||||||
2 | AP2 | 52.9 | 9.1e-17 | 171 | 223 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa+a+++a+ +++g+ Pd.00g1166550.m01 171 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYNTQEEAAAAYDRAAIEYRGA 223 89****99**********99966...3.6*************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 377 aa Download sequence |
MAANYSALLL RARWSNEDDV IKTWPETPHL NQAENQKPKA KRIRKNQNNP TEKCQNGTNP 60 NTGGGRRSSI YRGVTRHRWT GRFEAHLWDK SSWNNIQNKK GRQVYLGAYD SEEAAAHTYD 120 LAALKYWGPG TTLNFPIETY TKELEEMQKA SREEYLASLR RRSSGFSRGV SKYRGVARHH 180 HNGRWEARIG RVFGNKYLYL GTYNTQEEAA AAYDRAAIEY RGANAVTNFD INNYIDKFKK 240 ESEETPPKCF DAGLPEDEKV ERKYPHLLHC IESNTMDQVM DAADEHKFTW NFLDTGLMAQ 300 LPVPDIPLDN KPLELPDFFE DLRFEENFDL IFGAAGDADL GGLMESAGCG VEGGVPRNLE 360 DNRSSSSPSS TTTSVSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54320.1 | 5e-97 | AP2 family protein |