PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1166120.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Dof

Protein Properties

Length: 422aa MW: 46483.9 Da PI: 6.991

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1166120.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	107.2	8.8e-34	86	146	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k l+cprC+s +tkfCy+nnys+ qPr+fCk+CrryWt+GG++rn+P+G+ r +nk+ss Pd.00g1166120.m01 86 PDKVLPCPRCNSLKTKFCYFNNYSVYQPRHFCKSCRRYWTAGGTIRNLPLGTRRHRNKHSS 146 78999****************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MSVHNSNEEC WVADMPKAGM GECREMEDPS VKVSCKQDQF FELDKGSENN HHGQILENEG 60 EVDCNPEEDY IASDTDDGKE KSFTKPDKVL PCPRCNSLKT KFCYFNNYSV YQPRHFCKSC 120 RRYWTAGGTI RNLPLGTRRH RNKHSSSQYQ VVGEPSAVPV TQGDTLNFVG QQHLLPVQLP 180 ASPKPVNGMR EVLNSGIDTV LVESIATALN HKNQKRSSKD GCAAAGDNSE EPLSSSSSLT 240 ATTSQKNACL GKEMEQVDLP RYGNDYNLTY TEQYFPLPQW AENSSWGMMM FGPHSNNPNP 300 SHMGSLPMVT VPGFCIPSFI FPIAPSSYQG YIPSSDAKKW NAQLVGSDGS LSPSSSNGNS 360 RCSGNSSPRS GKYSRDANVP AGMKTKRCLW VPKTLRIDDP DEAAKSSIWS TLCIKPDKNA 420 PV

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MSVHNSNEEC WVADMPKAGM GECREMEDPS VKVSCKQDQF FELDKGSENN HHGQILENEG  60
EVDCNPEEDY IASDTDDGKE KSFTKPDKVL PCPRCNSLKT KFCYFNNYSV YQPRHFCKSC  120
RRYWTAGGTI RNLPLGTRRH RNKHSSSQYQ VVGEPSAVPV TQGDTLNFVG QQHLLPVQLP  180
ASPKPVNGMR EVLNSGIDTV LVESIATALN HKNQKRSSKD GCAAAGDNSE EPLSSSSSLT  240
ATTSQKNACL GKEMEQVDLP RYGNDYNLTY TEQYFPLPQW AENSSWGMMM FGPHSNNPNP  300
SHMGSLPMVT VPGFCIPSFI FPIAPSSYQG YIPSSDAKKW NAQLVGSDGS LSPSSSNGNS  360
RCSGNSSPRS GKYSRDANVP AGMKTKRCLW VPKTLRIDDP DEAAKSSIWS TLCIKPDKNA  420
PV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	4e-34	Dof family protein