PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g1164510.m02 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | CPP | ||||||||
Protein Properties | Length: 794aa MW: 87082.1 Da PI: 5.8987 | ||||||||
Description | CPP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCR | 49.8 | 7e-16 | 497 | 535 | 2 | 40 |
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+CnCkkskClk+YCeCfaag++C e C+C++C+Nk Pd.00g1164510.m02 497 SCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQECFNKP 535 689**********************************96 PP | |||||||
2 | TCR | 50.5 | 4.1e-16 | 582 | 620 | 1 | 39 |
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks+ClkkYCeC++ g+ Cs +C+Ce+CkN Pd.00g1164510.m02 582 RHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNA 620 589***********************************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 794 aa Download sequence |
MDTPERNQIG TPKAKFEDSP VFNYINSLSP IKPVKSVHIT QTFSSLSFAS LPSVFTSPHV 60 SAHKESRFLR RHNTSDPSKP ESSLESGNKV SANEDAAQLY INSEELREDC VPGVSTGEDS 120 VEPSSEHSKF VIELPRNLKY DCGSPDCRPT TSCGTEAYCE LEVADLSAPL VPYVQKTSEE 180 GSSNDEAHLQ IICQTLQRKE GTGCDWESLI SDAADLLIFD SPNGTEAFKG LMQNSLDPAT 240 RFCTSLAPQL TQNDVNDEQN VQVLDIVGSG GQLETEDPSS QYGEASQLER TEQMEDHLNN 300 CMVSSQSEKE DNKVETPMQF NCKPAVLNLQ RGLRRRCLDF EMAGARRKSL DNVSNSSSNM 360 LSQSDEKITT NDKQLVPMKP GGESSRCILP GIGLHLNALA KTSKDYKIIK CESLAYGRQL 420 SLPNSTADIH SPTGGQGPGH ESFSSASSER DMDGTENGVQ LAHDASQEPS FLANEEFNQN 480 SPKKKRRRFE HAGETESCKR CNCKKSKCLK LYCECFAAGV YCIEPCSCQE CFNKPIHEDT 540 VLATRKQIES RNPLAFAPKV IRSSDSVPEL GEESSKTPAS ARHKRGCNCK KSSCLKKYCE 600 CYQGGVGCSI SCRCEGCKNA FGRKDGSFIG TEAELDEEEA EACEKSVAEK HQQKIEIQKN 660 EEQRLDSALP TTPLRLSRQM VSLPFSSKNK PPRSSVFSIG GSSSGLYTSQ KLGKPNILRP 720 ESKFERHSQT VPEDEMPEIL QGDGSPSTGV KTASPNSKRV CPPNSDFGPS PGRRTGRKLI 780 LQSIPSFPSL TPQH |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 483 | 488 | KKKRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G14770.1 | 1e-144 | CPP family protein |