PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1159350.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 453aa    MW: 50901.1 Da    PI: 8.6956
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1159350.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR128.93.8e-0967115150
               FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktek 50 
                        kfYn+YA+++GFs+r+s+ +k  ++g+  ++ fvC  e +r ee k++ k
  Pd.00g1159350.m01  67 KFYNAYAYNIGFSIRRSSFHKF-KSGQLRDKLFVCFAEDRRYEELKAEFK 115
                        6*****************9999.6777***********999998887333 PP
Sequence ? help Back to Top
Protein Sequence    Length: 453 aa     Download sequence    
MNMENNCMED GEGETSTGLN ISEGESNDKS SQAMKGNEKI DLVHSSIRKQ LIPVIGMEFE  60
TEDLAFKFYN AYAYNIGFSI RRSSFHKFKS GQLRDKLFVC FAEDRRYEEL KAEFKASQSS  120
PTLSFPVEIL KHAANVYTPK VFKVFQDELC KAYDCALHFI DEMGTISKYE VIPYGKNWQH  180
IVTFDSTNNV TLCSCKKFEF AGILCAHALK VLSTRNVKSI PAQYILKRWT KNVKAMSAKI  240
NSSSSTNDPK VKIVRRYREL CRLHTQLATR AAGYGKAYEI VIQRLNRTFD EVDACLKEKS  300
SQEMSEVISP VINSRSELNE CINVDDDIIK ARGIKIKERV VGSSKRPKNA LEKLAKKRRT  360
RKTELPNSSS VDSICVPTTK AALAPLSEFS QELVAVNNLN MEFPVSMVNL LQAQSPLEGE  420
FGLFSSQFTS TGAKSSSVEV DPPFSIDKSH QAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27110.25e-27FAR1 family protein