PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1158050.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 422aa MW: 46639.6 Da PI: 4.3458

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1158050.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	75.3	1.4e-23	9	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 +p Gf+F+P+d+el+ + L +kv+g++++ ++v++e+++y k ePwd+ + + ++ +++yfF+k + + +g+r r++ +g+Wk Pd.00g1158050.m01 9 VPIGFKFRPSDDELLRYCLLNKVSGTPFKYSNVVPEFNLYgKKEPWDIWNdfggQNLEKGEDLYFFTKLKLVTGKGSRVARTIGNGTWKGED 100 589*************************9***99456*753444333356789**********************999 PP NAM 88 kdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 k ++v + k++ gl k + + ++++ ++ W+mhey+l Pd.00g1158050.m01 101 KGTTVRDPakKNTPLGLCKRFRYE--NEKSDQHGCWIMHEYSL 141 9999998865666799999998..44455699*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MAPCEYADVP IGFKFRPSDD ELLRYCLLNK VSGTPFKYSN VVPEFNLYGK KEPWDIWNDF 60 GGQNLEKGED LYFFTKLKLV TGKGSRVART IGNGTWKGED KGTTVRDPAK KNTPLGLCKR 120 FRYENEKSDQ HGCWIMHEYS LHPSLVKPQS NSNTCGCDGK YVLCRIRKNG RKRKLSENDG 180 VGGHALILQS PTKIPRQLES SDEVVLGANS TPISEVTNHY NQQPEQTTTA NAYLPMDQPH 240 YFLTDYPTTM ASASTSPPPS LPQPDYGFEL ISDTDHQPAQ GAGFNYDLSQ FLDSDDVDAL 300 LKDLSNLDNI QPLTAQPLGG GSHPYPCIIE ESAVDEDSGN INTGLGISSE DQTSGELGTE 360 NVSLNVSGFP VHDDEMLDFL NCASFDDLVD MIQFEDNDDE LQAFATSQSV MGMESTTTAT 420 TY

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MAPCEYADVP IGFKFRPSDD ELLRYCLLNK VSGTPFKYSN VVPEFNLYGK KEPWDIWNDF  60
GGQNLEKGED LYFFTKLKLV TGKGSRVART IGNGTWKGED KGTTVRDPAK KNTPLGLCKR  120
FRYENEKSDQ HGCWIMHEYS LHPSLVKPQS NSNTCGCDGK YVLCRIRKNG RKRKLSENDG  180
VGGHALILQS PTKIPRQLES SDEVVLGANS TPISEVTNHY NQQPEQTTTA NAYLPMDQPH  240
YFLTDYPTTM ASASTSPPPS LPQPDYGFEL ISDTDHQPAQ GAGFNYDLSQ FLDSDDVDAL  300
LKDLSNLDNI QPLTAQPLGG GSHPYPCIIE ESAVDEDSGN INTGLGISSE DQTSGELGTE  360
NVSLNVSGFP VHDDEMLDFL NCASFDDLVD MIQFEDNDDE LQAFATSQSV MGMESTTTAT  420
TY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17260.1	1e-18	NAC family protein