PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1158020.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 425aa MW: 47005 Da PI: 4.3307 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 80.8 | 2.9e-25 | 9 | 141 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 +p Gf+F+P+d+el+ +yL +kv+g++++ ++v++e+++y k ePwd+ + + ++ +++yfF+k + + +g+r r++ +g+Wk Pd.00g1158020.m01 9 VPIGFKFRPSDDELLRYYLLNKVSGTPFKYSNVVPEFNLYgKKEPWDIWNdfggQNLEKGEDLYFFTKLKLVTGKGSRVARTIGNGTWKGED 100 589***************************9*******99456*****753444333356789**************************999 PP NAM 88 kdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 k ++v + k++ gl k + + ++++ ++ W+mhey+l Pd.00g1158020.m01 101 KGTTVRDPakKNTPLGLCKRFRYE--NEKSDQHGCWIMHEYSL 141 999999886566679999**9998..44455699*******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 425 aa Download sequence |
MAPCVYADVP IGFKFRPSDD ELLRYYLLNK VSGTPFKYSN VVPEFNLYGK KEPWDIWNDF 60 GGQNLEKGED LYFFTKLKLV TGKGSRVART IGNGTWKGED KGTTVRDPAK KNTPLGLCKR 120 FRYENEKSDQ HGCWIMHEYS LHPSLVKPQS NSNTCGCDGK YVLCRIRKND RKRKLSENDG 180 VGGHALILQS PTKILRQLES SDEVVLGANS TPISEASDVT NHYNQQPEQT TTANAYLPMD 240 QPHYFLTDYP TTMASASTSP PPSFPQPDCG FELISDTDHQ PAQGAGFNYD LSQFLDSDDV 300 DALLKDLSNL DNIQPLTAQP LGGGSHPYPC IIEESAVDED SGNINTGLGI SSEDQTSGEL 360 GTENVSLNVS GFPVHDDEML DFLNCASFDD LVDMIQFEDN DDELQGFAKS ESVMGMESTT 420 TATTY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G17260.1 | 9e-20 | NAC family protein |