PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1157790.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 271aa    MW: 31448.5 Da    PI: 4.6627
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1157790.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.72.7e-104712699
                       T---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                 B3 26 hggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                       hg  ++ s ++ l+ +sg + e+kl  r++ g+++++kGW eF k   L+ g  +vF+++g  +f+++v +f++
  Pd.00g1157790.m01  4 HG--EHLSDQIHLKLPSGSESEIKL--RRCAGEFWFEKGWPEFSKFCSLDFGSCLVFRYEG--KFKFHVLIFDE 71
                       54..346778999************..*******************************977..8888****997 PP
2B339.21.2e-121942701798
                        E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                 B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                         +p +f +++  +  +++t++l     r W v+l    +++ y +++GW  F kan LkegD+++F+l+++++  l v +fr
  Pd.00g1157790.m01 194 HVPASFRKHFTPV--KNQTVRLLV-GDRLWPVTL--IFHPQNYRFSAGWGAFEKANWLKEGDICIFELMDKKNLVLEVNIFR 270
                        5788886555544..455788776.679******..66777799************************99999999999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MDKHGEHLSD QIHLKLPSGS ESEIKLRRCA GEFWFEKGWP EFSKFCSLDF GSCLVFRYEG  60
KFKFHVLIFD ESGTEIEYPI MPQIEGTDEE EDDDMSVEEI WEIEDDEEDD KSVESLEIET  120
DESLEILLID EDDDVKSVES LEFFPLSQTQ EKNRRKPRSS SKPSSLRATV KAANKFVASH  180
PFFKITLGPS RKAHVPASFR KHFTPVKNQT VRLLVGDRLW PVTLIFHPQN YRFSAGWGAF  240
EKANWLKEGD ICIFELMDKK NLVLEVNIFR C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49475.15e-18B3 family protein