PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1156530.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 249aa MW: 27396 Da PI: 8.9959 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 96.1 | 5.4e-30 | 98 | 235 | 6 | 128 |
NAM 6 rFhPtdeelvveyLkkkvegkk....leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tksg 81 +F+P+d el+ e+L++k+ + + ++e+i+++d iy+ +P +Lp k++ ++ +fF+k+ ++yatg+rk+r+ t++ Pd.00g1156530.m01 98 HFDPSDAELL-EHLAAKCGVGNrkphMFIDEFIPTLDgdngIYYDHPANLP-GSKNDGSSFHFFHKTINAYATGHRKRRKvdchcslaTEHV 187 6*********.899999766554565444456777766677**********.556778899******************87999999999** PP NAM 82 yWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 W++tgk+k++++ +g ++g+kk++v+y +++ +k+ k++Wvmh+y+l Pd.00g1156530.m01 188 CWHKTGKTKPIME-NGVQKGCKKIMVLYksSKKGSKADKSNWVMHQYHL 235 *************.999***********4334667888*********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MLRKLSLQSN SFNGTVPSSL SQCALLRSVF LQNNSLSGKL PAEIGNLSNL QIFNIASNHL 60 SGEISGELPP RLKYLNLSSN SFSGEIPKSI VNLTGLQHFD PSDAELLEHL AAKCGVGNRK 120 PHMFIDEFIP TLDGDNGIYY DHPANLPGSK NDGSSFHFFH KTINAYATGH RKRRKVDCHC 180 SLATEHVCWH KTGKTKPIME NGVQKGCKKI MVLYKSSKKG SKADKSNWVM HQYHLGTEDG 240 EKEGESGSA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14490.1 | 7e-54 | NAC family protein |