PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1152780.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 317aa    MW: 35812.3 Da    PI: 8.4839
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1152780.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM109.15.1e-34571971128
                NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......lelee...vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk... 79 
                        lp+G++F+Ptd+e++ ++L++kv +++      ++  e   +++   +i++++P++Lp  v+++ +  +fF++ +k+y+tg+rk+r+++   
  Pd.00g1152780.m01  57 LPAGVKFDPTDQEIL-QHLEAKVLSDTrklhplID--EfipTLEGEnGICYTHPEKLP-GVNKDGQIRHFFHRPSKAYTTGTRKRRKVHtee 144
                        799***********9.99****9999956644322..22222333336**********.666777788******************744446 PP

                NAM  80 ...sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                           + +W++tgk+++vl+ +g+++g kk+Lv+y   gr++k+ekt+Wvmh+y+l
  Pd.00g1152780.m01 145 dgsETRWHKTGKTRPVLV-GGAVKGFKKILVLYtnYGRQRKPEKTNWVMHQYHL 197
                        555778************.9*************66589**************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MTWCNDSDDE RAIQIITPPP PPPPPHNNNE FRNITCPSCG HHIEFQDQAG IHDLPGLPAG  60
VKFDPTDQEI LQHLEAKVLS DTRKLHPLID EFIPTLEGEN GICYTHPEKL PGVNKDGQIR  120
HFFHRPSKAY TTGTRKRRKV HTEEDGSETR WHKTGKTRPV LVGGAVKGFK KILVLYTNYG  180
RQRKPEKTNW VMHQYHLGNN EEEKDGELVV SKVFYQTQPR QCGSSIKDVQ MFDHHKGVNI  240
RSGHGHDPLP IAKKAGLVEY YNPGGGFINY DHHNLHNQGG HNRESPPQLI PNLVVQGDGS  300
SFIRLTADAS KGKLERK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.11e-125NAC family protein