PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1149740.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | GRAS | ||||||||
Protein Properties | Length: 386aa MW: 42774.5 Da PI: 6.0495 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 419.5 | 2.8e-128 | 14 | 373 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 +lLl+cAeavs++++ +a+++L ++sel++p g++ qR+aayf eA++arl++s+ ++y++lpps + +++++ ++a+++f+ +sP++kf Pd.00g1149740.m01 14 LTLLLQCAEAVSADNFDEATKILLEISELSTPFGTSAQRVAAYFSEAMSARLVSSCLGIYASLPPSYVPISHTQKMVSAFQVFNGISPFVKF 105 579***************************************************************************************** PP GRAS 94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakr 185 sh+taNqaI ea+e+e+rvHi+D+di+qGlQWp L++ LasRp+gpp +R+Tg+g s e+le+tg+rL++fA++lg+pfef + va++ Pd.00g1149740.m01 106 SHFTANQAIQEAFEREDRVHIVDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGT----SMEALEATGKRLSDFADKLGLPFEFFP-VAEK 192 ********************************************************....***************************.7*** PP GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277 + +l++e+L+++++Ea+aV++ h+l+d ++s ++ +L+l+++l Pkvv+vveq+++h ++sFl rf+ea++yysalfdsl a++++ Pd.00g1149740.m01 193 VGSLDPERLNISKREAVAVHWLQ--HSLYDVTGSDSN----TLWLLQRLAPKVVTVVEQDLSH-AGSFLGRFVEAIHYYSALFDSLGASYGE 277 **********************9..999999999999....**********************.899************************* PP GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvs 369 eseer++vE++ll+rei+nv+a g +r + + +++Wre+++++GF+ ++l +aa+qa lll +++sdgy++ e++g+l lgWkd L++ Pd.00g1149740.m01 278 ESEERHVVEQQLLSREIRNVLAVGGPSRSGEVK-FHNWREKFQQSGFRGISLAGNAATQATLLLGMFPSDGYTLVEDNGTLKLGWKDLCLLT 368 ***************************888776.********************************************************** PP GRAS 370 vSaWr 374 +SaWr Pd.00g1149740.m01 369 ASAWR 373 ****8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 386 aa Download sequence |
MRQQKRDEEG LHLLTLLLQC AEAVSADNFD EATKILLEIS ELSTPFGTSA QRVAAYFSEA 60 MSARLVSSCL GIYASLPPSY VPISHTQKMV SAFQVFNGIS PFVKFSHFTA NQAIQEAFER 120 EDRVHIVDLD IMQGLQWPGL FHILASRPGG PPYVRLTGLG TSMEALEATG KRLSDFADKL 180 GLPFEFFPVA EKVGSLDPER LNISKREAVA VHWLQHSLYD VTGSDSNTLW LLQRLAPKVV 240 TVVEQDLSHA GSFLGRFVEA IHYYSALFDS LGASYGEESE ERHVVEQQLL SREIRNVLAV 300 GGPSRSGEVK FHNWREKFQQ SGFRGISLAG NAATQATLLL GMFPSDGYTL VEDNGTLKLG 360 WKDLCLLTAS AWRPPFHATT NPNLHY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54220.1 | 0.0 | GRAS family protein |