PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1149200.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 336aa    MW: 37724.8 Da    PI: 4.8393
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1149200.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY34.93.1e-11190224234
                        --SS-EEEEEEE--TT-SS-EEEEEE-ST..T--- CS
               WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa..gCpv 34 
                        dDg+ WrKYGqK + +s+++r Y + +    +C++
  Pd.00g1149200.m01 190 DDGHGWRKYGQKRILNSKHSREYLKASELllDCTS 224
                        8************************9987778876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MTSHDNNVNR RARVEALRHM LYDVEAHLAV GGNRVLNLGG LIMEWSWPES VLSNGERVKE  60
ELMQGRELAG QLCRVFDDHK STLVSSFGGG SAEDLVDKIL GSFANTLLIL NGKESDEEIV  120
SGDQIQGISG GGGSADSSSW DANHTAAVIK SEDFYEESCK STSTFKDGRG SYKRRKTSHC  180
WTRDTPALTD DGHGWRKYGQ KRILNSKHSR EYLKASELLL DCTSPRESSN FIRFGDTKQD  240
HPFFSFFTSV KKEELVFKEE SIIKEEIPPT SDDRVITSHD NHSWLCDYLV SPDLTMFESS  300
GPLNGFSSTL DEFDHEDVIS RLMMGSFDLD EVLQYI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.14e-11WRKY family protein