PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1148030.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 509aa    MW: 57589.8 Da    PI: 4.3578
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1148030.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS113.43e-351634812315
               GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                        ++lL +  ea++ g+ el + +L  lse ++p g++++Rla+ + +    +  +           +++   + ++  aa++lf++ +P  +f
  Pd.00g1148030.m01 163 RHLLKAYGEAMEMGQRELEEVILRCLSEKVNPLGQSLERLAFNLCQEVDDQQGD----Y-----LKQE---SCKNFEAAFNLFYQSFPDGRF 242
                        78999999*********************************9877665555444....2.....2233...356777999************ PP

               GRAS  94 shltaNqaIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg......skeeleetgerLakfAeelgvpfef 178
                        +h +aN aIlea+ ++ e+vHi+Dfd+++G+Q   L++a a+R +   +l++T+++   ++       + + eet+++L++ A+++g++++ 
  Pd.00g1148030.m01 243 AHYVANTAILEAIPEDaETVHIVDFDMGEGVQLSQLIEAVAQRHK---TLKLTAIKWDVEEtedgapPQWRFEETKRQLQHHARSFGLNLKV 331
                        *************8777**************************66...5******976555677999999********************** PP

               GRAS 179 nvlvak.rledleleeLrvkpgEalaVnlvlqlhrll........desvsleserdevL...klvkslsPkvvvvveqe..adh.nsesFle 255
                        + ++ k  +++++  + r   +E la n+++ l ++          e v+l    +++L      ks +  ++++ + +  a++ n++sF  
  Pd.00g1148030.m01 332 EEIAIKdLVSEVKKANKRGGGREFLAFNCMVGLPHMRrrrsrgliLEFVQL---AKDLLassANYKSSNRGIITFGDGDacAKLgNGSSFSS 420
                        **9555245555555555555************999833333333222222...22333111345666778*******97556699****** PP

               GRAS 256 rflealeyysalfdsleaklpres.eerikvErellgreivnvvacegaerrerhetlekW 315
                         f   l +y al++s+e+++pr+  e+r+++E +++++ +++    ++ + + ++ +l+ W
  Pd.00g1148030.m01 421 FFDGYLAHYQALLESIESNFPRHLaEARMVIELMFVAPYVSSQALFQKWNEVREESHLQPW 481
                        **********************9879*************9998888888877777778888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 509 aa     Download sequence    
MMQSELLPPF WPYLNVINSP FDQFEYNDVN MGSSDFSSPF MASDEFSETS SFPFATMFSG  60
DFEQLADCDH LLQVTSSVEE FPMDLGGFEP NYLIGDIEGM YACLERSEGS TLPSQQFSIE  120
GNDVWSPNSL MTSEASSMDV TSIQQSLTLP REEMEIDNEL SIRHLLKAYG EAMEMGQREL  180
EEVILRCLSE KVNPLGQSLE RLAFNLCQEV DDQQGDYLKQ ESCKNFEAAF NLFYQSFPDG  240
RFAHYVANTA ILEAIPEDAE TVHIVDFDMG EGVQLSQLIE AVAQRHKTLK LTAIKWDVEE  300
TEDGAPPQWR FEETKRQLQH HARSFGLNLK VEEIAIKDLV SEVKKANKRG GGREFLAFNC  360
MVGLPHMRRR RSRGLILEFV QLAKDLLASS ANYKSSNRGI ITFGDGDACA KLGNGSSFSS  420
FFDGYLAHYQ ALLESIESNF PRHLAEARMV IELMFVAPYV SSQALFQKWN EVREESHLQP  480
WFGLEGKRLS RESLMEAKEM VGESSYGIL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1343349VKKANKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.15e-14GRAS family protein