PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g114400.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 375aa MW: 40992.8 Da PI: 7.7387

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g114400.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.8	5.7e-34	106	160	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPk+i+++m+vkgLtl+h+kSHLQkYRl Pd.00g114400.m01 106 KPRLRWTAELHERFVDAVTQLGGPDKATPKAIMRTMGVKGLTLYHLKSHLQKYRL 160 79****************************************************8 PP
2	Myb_DNA-binding	76.2	4.6e-24	108	159	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e++vdav+qlGg+ t+k+I+rtmg kg+tl+++ks++qky+ Pd.00g114400.m01 108 RLRWTAELHERFVDAVTQLGGPdkaTPKAIMRTMGvKGLTLYHLKSHLQKYR 159 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MEDGRHIDTC FQHKKEARVV LIFSLPLSKF SQHKPISPNS LIYLLLFFSA FSGLRAPNPR 60 RSLSMYSAIH SLPMDGSICG HGEFSGSLDG TNLPGDACLV LTTDPKPRLR WTAELHERFV 120 DAVTQLGGPD KATPKAIMRT MGVKGLTLYH LKSHLQKYRL GKQSCKDSAE NSKDGIAASC 180 IAESQDTGSS SATSSRVIAQ DLNDGYQVTE ALRVQMEVQR RLHEQLEVQR RLQLRIEAQG 240 KYLQSILEKA CKALNDQAAS AAGLEAAKEE LSELAIKVSN DCEGITPLDT MKMPSLSEIA 300 AALENRNASN VLARLGNCSV DSCLASTGSP VSPMDMSSLA AAMKKRQRPF FGNGDSLPLE 360 GNMRQEVEWM MSNYG

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MEDGRHIDTC FQHKKEARVV LIFSLPLSKF SQHKPISPNS LIYLLLFFSA FSGLRAPNPR  60
RSLSMYSAIH SLPMDGSICG HGEFSGSLDG TNLPGDACLV LTTDPKPRLR WTAELHERFV  120
DAVTQLGGPD KATPKAIMRT MGVKGLTLYH LKSHLQKYRL GKQSCKDSAE NSKDGIAASC  180
IAESQDTGSS SATSSRVIAQ DLNDGYQVTE ALRVQMEVQR RLHEQLEVQR RLQLRIEAQG  240
KYLQSILEKA CKALNDQAAS AAGLEAAKEE LSELAIKVSN DCEGITPLDT MKMPSLSEIA  300
AALENRNASN VLARLGNCSV DSCLASTGSP VSPMDMSSLA AAMKKRQRPF FGNGDSLPLE  360
GNMRQEVEWM MSNYG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13640.1	1e-121	G2-like family protein