PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1140520.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ARR-B

Protein Properties

Length: 1132aa MW: 126126 Da PI: 7.7215

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1140520.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	77.2	2.2e-24	210	263	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kp+++Wt+ LH++F+ a++++ G +kA+Pk+ile+m+v+gLt+e+v+SHLQkYR+ Pd.00g1140520.m02 210 KPKVVWTNSLHNQFLLAIKHI-GLDKAVPKRILEFMNVPGLTRENVASHLQKYRI 263 79*****************.******************************6 PP
2	Myb_DNA-binding	26.5	1.5e-08	213	262	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT ++ +++ a+k G + +k+I + m+ g+t++++ s++qky+ Pd.00g1140520.m02 213 VVWTNSLHNQFLLAIKHIGLDkaVPKRILEFMNvPGLTRENVASHLQKYR 262 68***********************************************7 PP
3	Response_reg	75.5	1.9e-25	27	135	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedaleal 90 +l+vdD+ + + ++ +l+ y +v +++++ +al++l++++ +Dl+++D+ mp+m+G+el k+ +ee klp+i+++a ++e+ +l+ l Pd.00g1140520.m02 27 ILVVDDDATTLAIVSAMLKTWSY-QVVSVRNPIDALATLRARKgiFDLVVTDLHMPQMNGFELQKHVHEEF-KLPVIMMSADDKESVILKSL 116 89*******************.9999*******99999*********************99.**************** PP HTTESEEEESS--HHHHHH CS Response_reg 91 kaGakdflsKpfdpeelvk 109 + G+ +++Kp++++++ + Pd.00g1140520.m02 117 EGGVVYYIVKPVSKDDIKN 135 *************9976 PP

Sequence ? help Back to Top
Protein Sequence Length: 1132 aa Download sequence
MDAATERSEF RQSSANTKPS FVDMINILVV DDDATTLAIV SAMLKTWSYQ VVSVRNPIDA 60 LATLRARKGI FDLVVTDLHM PQMNGFELQK HVHEEFKLPV IMMSADDKES VILKSLEGGV 120 VYYIVKPVSK DDIKNVWQYA VAAKKGKSVT IEEIESAPGE APGEVEDGSS ETSSDTDEEK 180 QEKKAEAKVK KERKRHREDD NEERMVAPKK PKVVWTNSLH NQFLLAIKHI GLDKAVPKRI 240 LEFMNVPGLT RENVASHLQK YRIFLKRVAE KARLSKCLSE RVFRSSFALG HPALVFNNVQ 300 RDQYYSQLLN PQQMGTSIAS TFQPSAGNGN TLALTAAASN NLGSIQFPNY HQSSSSNSSR 360 SFPQLIGSGQ LPLLSNNQAN ILCQQPMLGN GNGDQLLCQA NSRTAAFGVQ QLMNTFGNGG 420 MSFGLTNNNF GLTNNNIGTN SLMQVHPQQS QPRQNRVFTF TNNPFSYNFA TSGNQISSSY 480 TPLSSSFENM GSTVNNVNQR VPNSSHQLVS NFAGSQIMSS SGRELVGLMG SQPAGMLNNI 540 TNINIGGGYP NVSLTGAPIG NNNGIFNSGY MAQLGASSSS MSSSAGFEIN ASSAYQFPPS 600 LLKNNGDDQQ QNVPVLPPSA GNINDQCGLA NMNVGGGNVE NSHSGVMDNT ITTDAPPTLI 660 NNNNISHEQE LVGDIDDLML SNLFMDQQNY EPSPPPFQQQ QEGGDQQVVN PEFDGNVFDS 720 EDYSILFDPE HPFQDCDDDF LNAILDSDMV RGSVAFISSS VKEKKMRPIF CGNFEYDARQ 780 NELERLFGRY GKVDRVDMKS GFAFIYMEDE RDAEYAIRGL DRKEFGRKGR RLRVEWTKHE 840 RGTIRPGASR RSSTNTRPSK TLFVINFDPY HTRTKDLERH FDPYGKIVSV RIRRNFAFVQ 900 YESQEDATRA LEATNMSKLM DRVISVEYAV RDDDERRDGF SPDRRSRDRS LDRGRDRRRS 960 PSPYKRERGS PDYGRGPSPG PYRRERGSPD YGRGPSPYRR ERVSPDYGRG RSPSPYRRER 1020 SDHGRISSRS PRKERRDRDS PENGAIESPY KRDRGSPENG AIQSPYKRDR SSPENGRGPS 1080 SSPYERERVS PEHGHGPSPN SVPEARGDSP NYGGPESPMQ ERYSSRSPQA EE

Sequence ? help Back to Top

Protein Sequence Length: 1132 aa Download sequence

MDAATERSEF RQSSANTKPS FVDMINILVV DDDATTLAIV SAMLKTWSYQ VVSVRNPIDA  60
LATLRARKGI FDLVVTDLHM PQMNGFELQK HVHEEFKLPV IMMSADDKES VILKSLEGGV  120
VYYIVKPVSK DDIKNVWQYA VAAKKGKSVT IEEIESAPGE APGEVEDGSS ETSSDTDEEK  180
QEKKAEAKVK KERKRHREDD NEERMVAPKK PKVVWTNSLH NQFLLAIKHI GLDKAVPKRI  240
LEFMNVPGLT RENVASHLQK YRIFLKRVAE KARLSKCLSE RVFRSSFALG HPALVFNNVQ  300
RDQYYSQLLN PQQMGTSIAS TFQPSAGNGN TLALTAAASN NLGSIQFPNY HQSSSSNSSR  360
SFPQLIGSGQ LPLLSNNQAN ILCQQPMLGN GNGDQLLCQA NSRTAAFGVQ QLMNTFGNGG  420
MSFGLTNNNF GLTNNNIGTN SLMQVHPQQS QPRQNRVFTF TNNPFSYNFA TSGNQISSSY  480
TPLSSSFENM GSTVNNVNQR VPNSSHQLVS NFAGSQIMSS SGRELVGLMG SQPAGMLNNI  540
TNINIGGGYP NVSLTGAPIG NNNGIFNSGY MAQLGASSSS MSSSAGFEIN ASSAYQFPPS  600
LLKNNGDDQQ QNVPVLPPSA GNINDQCGLA NMNVGGGNVE NSHSGVMDNT ITTDAPPTLI  660
NNNNISHEQE LVGDIDDLML SNLFMDQQNY EPSPPPFQQQ QEGGDQQVVN PEFDGNVFDS  720
EDYSILFDPE HPFQDCDDDF LNAILDSDMV RGSVAFISSS VKEKKMRPIF CGNFEYDARQ  780
NELERLFGRY GKVDRVDMKS GFAFIYMEDE RDAEYAIRGL DRKEFGRKGR RLRVEWTKHE  840
RGTIRPGASR RSSTNTRPSK TLFVINFDPY HTRTKDLERH FDPYGKIVSV RIRRNFAFVQ  900
YESQEDATRA LEATNMSKLM DRVISVEYAV RDDDERRDGF SPDRRSRDRS LDRGRDRRRS  960
PSPYKRERGS PDYGRGPSPG PYRRERGSPD YGRGPSPYRR ERVSPDYGRG RSPSPYRRER  1020
SDHGRISSRS PRKERRDRDS PENGAIESPY KRDRGSPENG AIQSPYKRDR SSPENGRGPS  1080
SSPYERERVS PEHGHGPSPN SVPEARGDSP NYGGPESPMQ ERYSSRSPQA EE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	3e-55	ARR-B family protein