PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1140430.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 804aa MW: 90447.1 Da PI: 5.3868

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1140430.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	81.5	1.5e-25	179	263	3	88
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 Yn+YA+ vGF+vrk+ ++sk +g++++r+f+Cskeg+r+++k++ ++ +++r+etrtgC a++ ++++ dgk++vt++e++HnH Pd.00g1140430.m01 179 YNKYARLVGFNVRKDWVNRSKVHGQVVSRKFTCSKEGYRRKDKRD-VNVKKHRKETRTGCLAHMIITRQPDGKYQVTQFEEQHNHG 263 ****************************************999.999**********************************5 PP

Sequence ? help Back to Top
Protein Sequence Length: 804 aa Download sequence
MGAFKSAVNS LSCFQAALVL VLLIATAETQ MAEAQSSSSC STELSSLNVC APFVVPGSTN 60 TNPSSDCCGA LQAVHPDCLC NTLRAIGCGQ LKFTRKHYCT RSMEREDDDF GSLHEDSMDV 120 GLQATNRLDL NVEQDSRSPK VVYVNGTQSN PPSIGADSKD SVLEVGTEFE SDEHAYKSYN 180 KYARLVGFNV RKDWVNRSKV HGQVVSRKFT CSKEGYRRKD KRDVNVKKHR KETRTGCLAH 240 MIITRQPDGK YQVTQFEEQH NHGNVNSSIA QALPEQHNHD NVNLSIAQAL PLQRECTVPE 300 AADADSVKEL GSLSKSALDS MNRGFRVRES VDSFALDFEN YLQSERTQDM KEGENDWLKW 360 MFREREKWAV VYGRNTFFVD RKGSHLVESL FHDLRNYLYS DLDVLDFVKY FERVVDEQRY 420 KEIEANDEMN RCMPRLMGNV ILLKHASDVY TPRAFEVFQQ GYEKCLNIVV NQCSENGPLF 480 EYKTNIFGKS REHTVTFNSS DDSVICSCKK FDSVEFLCSH ALKVLDHMNI KVVPSKYILT 540 RWTKDARLGS ARENDVSSIR DNPKLVVASR YKNMCGRIIL LSAKASESEE AFQFAVGQLD 600 EVMEGVEKIL TLKPQDAQAF TSSSTANASD SERAVIFPDG NAIEDQDDNV VKGAKEKETA 660 VFDKGQLTNV NGEFSSTKRI QNVDTSLQNT DSCISSPSLY VSPEGTTANP IMQGLYNFEA 720 NQVVQCMYQQ DNLVMEEQTN PNMYQPLNYF SNQHDSPGHS QLLQEPLING TYQEPVSSTP 780 ELRQAMDLDV QHAHSSSFLL LDRG

Sequence ? help Back to Top

Protein Sequence Length: 804 aa Download sequence

MGAFKSAVNS LSCFQAALVL VLLIATAETQ MAEAQSSSSC STELSSLNVC APFVVPGSTN  60
TNPSSDCCGA LQAVHPDCLC NTLRAIGCGQ LKFTRKHYCT RSMEREDDDF GSLHEDSMDV  120
GLQATNRLDL NVEQDSRSPK VVYVNGTQSN PPSIGADSKD SVLEVGTEFE SDEHAYKSYN  180
KYARLVGFNV RKDWVNRSKV HGQVVSRKFT CSKEGYRRKD KRDVNVKKHR KETRTGCLAH  240
MIITRQPDGK YQVTQFEEQH NHGNVNSSIA QALPEQHNHD NVNLSIAQAL PLQRECTVPE  300
AADADSVKEL GSLSKSALDS MNRGFRVRES VDSFALDFEN YLQSERTQDM KEGENDWLKW  360
MFREREKWAV VYGRNTFFVD RKGSHLVESL FHDLRNYLYS DLDVLDFVKY FERVVDEQRY  420
KEIEANDEMN RCMPRLMGNV ILLKHASDVY TPRAFEVFQQ GYEKCLNIVV NQCSENGPLF  480
EYKTNIFGKS REHTVTFNSS DDSVICSCKK FDSVEFLCSH ALKVLDHMNI KVVPSKYILT  540
RWTKDARLGS ARENDVSSIR DNPKLVVASR YKNMCGRIIL LSAKASESEE AFQFAVGQLD  600
EVMEGVEKIL TLKPQDAQAF TSSSTANASD SERAVIFPDG NAIEDQDDNV VKGAKEKETA  660
VFDKGQLTNV NGEFSSTKRI QNVDTSLQNT DSCISSPSLY VSPEGTTANP IMQGLYNFEA  720
NQVVQCMYQQ DNLVMEEQTN PNMYQPLNYF SNQHDSPGHS QLLQEPLING TYQEPVSSTP  780
ELRQAMDLDV QHAHSSSFLL LDRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-25	FAR1 family protein