PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1136150.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Trihelix
Protein Properties Length: 303aa    MW: 34322.5 Da    PI: 8.5924
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1136150.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix68.41.4e-2138132185
           trihelix   1 rWtkqevlaLiearremeerlrrgk..........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyf 82 
                        rWt++e+ +Lie+++ +e+++++g+            +p+W+ vs+++++rg++r+p+qC+++w+nl  ++kki+++e++ +  ++s +++ 
  Pd.00g1136150.m01  38 RWTRHETFVLIEGKKVVENAVQKGRsrsssalgsdHFEPKWDLVSSYCKQRGVSREPVQCRKRWSNLLVDFKKIRNWESQIKGAAESFWVMR 129
                        8*********************986666777777688*******************************************988888888887 PP

           trihelix  83 dql 85 
                        +++
  Pd.00g1136150.m01 130 NDV 132
                        765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MALDSIKHEG ASSTTPDQVD RQQVPNGSSD DRAKRHPRWT RHETFVLIEG KKVVENAVQK  60
GRSRSSSALG SDHFEPKWDL VSSYCKQRGV SREPVQCRKR WSNLLVDFKK IRNWESQIKG  120
AAESFWVMRN DVRKERKLPG FFDREVYNIL DGNAVTATAA CPLALFIPVQ RDAQSDSEKS  180
EQEETESKKE NLMQDSPATT VTTPMPSSGT IKEKRGLDSN TCGEHISQEK RKQRRLAIDG  240
CEDNYSDQLI SVLERNNALL NAQLEARNIN CHLDREQRKE QSNSLLAAIS KVTDALVRIA  300
DKL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1229236EKRKQRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.19e-81Trihelix family protein