PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1128530.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | B3 | ||||||||
Protein Properties | Length: 258aa MW: 29449.5 Da PI: 8.5905 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 37.6 | 3.9e-12 | 132 | 238 | 1 | 98 |
EEEE-..-HHHHT.T-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--.TT-EEEEE CS B3 1 ffkvltpsdvlks.grlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLk.egDfvvFk 83 f+k+l sdv + +rl++ k+ +e++ g++ +e++++t +d g+++ + ++++ ++ +vlt+GWk F+++ +L Dfv++ Pd.00g1128530.m01 132 FEKQLALSDVRDNqCRLSMNKEDVENNimpllrnGENLNEGIDVTTYDMAGNEYPMVFKVWATK-VHVLTGGWKTFCNDLRLVeNQDFVTLW 222 89999999998887**********999******966677999****************999997.789*************98578999987 PP E-SS.SEE..EEEEE- CS B3 84 ldgr.sefelvvkvfr 98 ++ +++ l++ +++ Pd.00g1128530.m01 223 IFRHvDNGGLCFAIYS 238 5555567767777766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MASREDREDT GYGDGMTTSS TEEGAYLLLH LKHTILNPET ARNLEHMKSK ILSGIKLKSP 60 SGSKRKALRI QEPEAPQARE ATNGAARGRS LPRELQFQQE ERGGLFYGNY TPPDLPPIPS 120 LQNLIQDCSK PFEKQLALSD VRDNQCRLSM NKEDVENNIM PLLRNGENLN EGIDVTTYDM 180 AGNEYPMVFK VWATKVHVLT GGWKTFCNDL RLVENQDFVT LWIFRHVDNG GLCFAIYSRR 240 LPVFEPIKKK RPIRKNYH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G03170.1 | 3e-28 | B3 family protein |