PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1128520.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 341aa    MW: 38375.8 Da    PI: 4.9114
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1128520.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B352.87.1e-17218323198
                        EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--.TT-EEEEEE CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLk.egDfvvFkl 84 
                        f+k+ltpsdv+k+ rl+l k+++e+h       g++++e++++t +d +g+++ +k++ ++++  yvl+kGWk F+++ gL  + Df+++ +
  Pd.00g1128520.m01 218 FEKQLTPSDVSKTPRLRLNKEYVENHikpvlikGENPNEGIDVTTYDMEGNEYPMKFTTWGTD-LYVLSKGWKTFCHDLGLVeTQDFLTLWV 308
                        99*******************************99999*******************878775.7***************98799***9886 PP

                        -SS.SEE..EEEEE- CS
                 B3  85 dgr.sefelvvkvfr 98 
                         ++ +++ l++ +++
  Pd.00g1128520.m01 309 FRHaKNGGLCFAIHS 323
                        666677777777766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MADDHNDDLP NEFAAAFSDS ESSNDELEGN NEPAENAQEE LAAATLQGTE VEAIVAQEPA  60
VPSLQHSTVF QEPAVASLQR STRFQESAVM AAHDMPDQPQ DREDPSYEDK EMTDSIKGAH  120
DLLYLKHKIL DYKTARKLEH MKSKILSGIE LNSPSGSNQK ALQIQESEAT NGAAQGRREL  180
QFQQEEGGGG LFYGHYAPPD LPPITSLQKL IQDCCKPFEK QLTPSDVSKT PRLRLNKEYV  240
ENHIKPVLIK GENPNEGIDV TTYDMEGNEY PMKFTTWGTD LYVLSKGWKT FCHDLGLVET  300
QDFLTLWVFR HAKNGGLCFA IHSRRLPVFE TIKKRRQRKQ N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G03170.11e-25B3 family protein