PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1122400.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 693aa MW: 78134 Da PI: 6.2247

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1122400.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	54.9	2.9e-17	62	136	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY+eYA+++GFs ++ +s++sk +g+++ r+fvC +eg ++++ ++ C+a+l+++++ ++kw+ tk+++eH+H+l+ Pd.00g1122400.m01 62 FYDEYARRLGFSSKVGQSSRSKPDGTTIAREFVCGREGLKRRHADS--------------CDAMLRIELKGQDKWVSTKFVKEHSHALV 136 9************************************9998777..............*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 693 aa Download sequence
MDVEVIDVEG MGHRGMADDG DAERSEGGEV NNAENSEAHD EDGISEPYVG MEFNSEEAAK 60 TFYDEYARRL GFSSKVGQSS RSKPDGTTIA REFVCGREGL KRRHADSCDA MLRIELKGQD 120 KWVSTKFVKE HSHALVSPGK VHYLRPRRHF AGAAKNVAET YQGVGIVPSG VIKSHVLREG 180 QERLAHVCQA HPYFEVELYN CINLTETIEE FELSWDSILD KYDLRRNDWL QSLYSARAQW 240 VPVYFRDSFS ASISPKPNQG HDGFFDGYVN QQTTLPMFFR QYERALENSF EREIEADFDT 300 ICTTPVLRTP SPMEKQAANL YTRKIFAKFQ EELVETFVYT ANRIEGDGAI STFRVAKFED 360 DHKAYIVTFN YPEMRANCSC QMFEYSGILC RHVLTVFTVT NVLTLPSHYI LKRWTRNAKS 420 GTTLDERSGE LHGQDSLTLR YNNLCREAIK YAEDGATTTE TFIAAMTALR DGGKKVSVVK 480 KNVAKVAPPN SQVSVTGYDD RKNSTSMSDM TPLLWPRQDE VMKRFNLNDA GAPAQTVSDL 540 NLPRMAPVSL HRDDGTPENM VVLPCLKSMT WVMENKNSAP GNRVAVINLK LQDYSRTIST 600 ESEVKFQLSR VSLEPMLRSM AYISDQLSTP ANKVAVINLK LQDAETTSGE SEVKFQVSRD 660 TLGAMLRSMA YIREQLSSAA EIQSESVSKK PRK

Sequence ? help Back to Top

Protein Sequence Length: 693 aa Download sequence

MDVEVIDVEG MGHRGMADDG DAERSEGGEV NNAENSEAHD EDGISEPYVG MEFNSEEAAK  60
TFYDEYARRL GFSSKVGQSS RSKPDGTTIA REFVCGREGL KRRHADSCDA MLRIELKGQD  120
KWVSTKFVKE HSHALVSPGK VHYLRPRRHF AGAAKNVAET YQGVGIVPSG VIKSHVLREG  180
QERLAHVCQA HPYFEVELYN CINLTETIEE FELSWDSILD KYDLRRNDWL QSLYSARAQW  240
VPVYFRDSFS ASISPKPNQG HDGFFDGYVN QQTTLPMFFR QYERALENSF EREIEADFDT  300
ICTTPVLRTP SPMEKQAANL YTRKIFAKFQ EELVETFVYT ANRIEGDGAI STFRVAKFED  360
DHKAYIVTFN YPEMRANCSC QMFEYSGILC RHVLTVFTVT NVLTLPSHYI LKRWTRNAKS  420
GTTLDERSGE LHGQDSLTLR YNNLCREAIK YAEDGATTTE TFIAAMTALR DGGKKVSVVK  480
KNVAKVAPPN SQVSVTGYDD RKNSTSMSDM TPLLWPRQDE VMKRFNLNDA GAPAQTVSDL  540
NLPRMAPVSL HRDDGTPENM VVLPCLKSMT WVMENKNSAP GNRVAVINLK LQDYSRTIST  600
ESEVKFQLSR VSLEPMLRSM AYISDQLSTP ANKVAVINLK LQDAETTSGE SEVKFQVSRD  660
TLGAMLRSMA YIREQLSSAA EIQSESVSKK PRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	0.0	FAR1 family protein